Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Acid345_0447 |
Symbol | |
ID | 4071694 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Candidatus Koribacter versatilis Ellin345 |
Kingdom | Bacteria |
Replicon accession | NC_008009 |
Strand | + |
Start bp | 528196 |
End bp | 529512 |
Gene Length | 1317 bp |
Protein Length | 438 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 637982451 |
Product | outer membrane efflux protein |
Protein accession | YP_589526 |
Protein GI | 94967478 |
COG category | [M] Cell wall/membrane/envelope biogenesis [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG1538] Outer membrane protein |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 7 |
Fosmid unclonability p-value | 0.109934 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCGACCGC GGCATCGATG CAATCAACCC GTTTCAGATT CAACTACATC CCCCTCATTT CATTTTCAGG CATTTGCTCT GTCAGCACTT CTCTTGCTCC TCCTCGGCGC TGGGATGGGG CAGACTGCGA CTCGCATCAC CCTCGATGAG GCGGTGGATC TCGCCCTTGC GAAAAGCCCT GCGTTACAGG CGCAGCGCAC GCTGATCTTG CAGAACGAGG CACAGGAGAT TACTGCCAAT CTTCGACCAA ATCCCACGTT AGGGGCGGAC AGCCAATTCG TTCCGATTTT CAGCCCGCAG GACTTTTCCG GAGACTACCT CGATCAAGCA CAGCAGTTCG ATATTGGCGT CGGGTATCTC TTCGAACGCG GTCACAAGCG GCAGAGGCGT TTACAAGCGG CCCGTGATCA GACGGCCGTC ACGAAGGCTC AGGTGGCCGA CGCCGAGCGC ACCCTCGCTT TCAACATAGG GCAGCAATTC GTAAGCGTAT TGCTCGCAGA ATCCACCTTG GACTTCGCTT CGCAGGACTT GAAGAGCTTT CAGCAGACGG TCGATATCAG CGAAACGCAA TATAAGGCTG GATACATCAG CGAAGGCGAT TACCTGAAGA TCAAGCTGCA ATTGTTGCAG TTTCAGACGG ACGTCTCTTC TGCACGACTT GCTAAGGTTC AAGCGCTCGC GGGATTGCGG CAATCGCTCG GATACAACAC GGTTCCCGTC GACTTTGACG TAGCCGGCGA CCTAGCTTTT CAGCCGCTGA AGGGGAGAGT GGAGGATCTG CAGATTCTGG CCATGCGCGA GCGGCCTGAT TTCCGAGCCT CTCAGCTAGG CGTGACCGCA GCACAAAGCC AGATTCAACT CGCCAAGGCC AACGCCAAAG TAGACGTAAA TGGCACCTAC GACGTCTCAC ATGTCGCCGG CGCGACGAGC GGGTCCATCT TCGTGAGTTT CGATCTTCCC ATCTTTAATC GGAACCAGGG AGAAATCGCG CGCACCCGGT ATGCTCTCAC TCAGGCGCAG GCGCAGGAAC AAGCAGCGAA TGACACGGTC ATGACAGATG TATTGAATGC TTACGAGGCA GTCGGCAGCA ACGAGCAGGT GGTGCAGTTG TACATTTCCG GATACCTCAA GGAATCGCAG GATTCTCGTG ACATCAGCGA GTATGCCTAC AAGCGCGGTG CCGCCAGCCT GTTGGATTAC CTCGACGCCG AGCGCAGTTT TCGCTCAGTG CAACTGGCGT ATCGCCAATC ACTGGCGTCT TACATGACGG CAATCGAACA ACTTAAGGAA GCTGTAGGGA CGAGGAAGCT GCCATGA
|
Protein sequence | MRPRHRCNQP VSDSTTSPSF HFQAFALSAL LLLLLGAGMG QTATRITLDE AVDLALAKSP ALQAQRTLIL QNEAQEITAN LRPNPTLGAD SQFVPIFSPQ DFSGDYLDQA QQFDIGVGYL FERGHKRQRR LQAARDQTAV TKAQVADAER TLAFNIGQQF VSVLLAESTL DFASQDLKSF QQTVDISETQ YKAGYISEGD YLKIKLQLLQ FQTDVSSARL AKVQALAGLR QSLGYNTVPV DFDVAGDLAF QPLKGRVEDL QILAMRERPD FRASQLGVTA AQSQIQLAKA NAKVDVNGTY DVSHVAGATS GSIFVSFDLP IFNRNQGEIA RTRYALTQAQ AQEQAANDTV MTDVLNAYEA VGSNEQVVQL YISGYLKESQ DSRDISEYAY KRGAASLLDY LDAERSFRSV QLAYRQSLAS YMTAIEQLKE AVGTRKLP
|
| |