Gene Acid345_0439 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAcid345_0439 
Symbol 
ID4071686 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCandidatus Koribacter versatilis Ellin345 
KingdomBacteria 
Replicon accessionNC_008009 
Strand
Start bp518789 
End bp519478 
Gene Length690 bp 
Protein Length229 aa 
Translation table11 
GC content58% 
IMG OID637982443 
Productcytochrome c oxidase subunit III 
Protein accessionYP_589518 
Protein GI94967470 
COG category[C] Energy production and conversion 
COG ID[COG1845] Heme/copper-type cytochrome/quinol oxidase, subunit 3 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0988011 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTGCGT TGAATGAACC ACTGAATCTA GCGCAAGCCG TCGAAGTTGA ACGCCAAGAG 
CGGCGTAAGA CGAGCGGCGG GTCGACAGTA CCGCCGAGTT CTACGAGCGG ACGCTTGCCG
TCTATAGCGG ATCCAGCGGG CGAATCGGTA CGTACGGGCG TGTGGGTCGG TCTGGCGACG
ATCGCGATGA TGTTTGCGGC GTTCACCAGC GCCGTCGTCG TGCGCAAGGG CGCTTCCAAT
GATTGGACCC ACATCGTACT GCCGAACATC CTCCTGCTGA ATTCGGCAGT GCTGGTGGCA
AGCAGCATCA CATTGGAGAT TGCACGCAAG AAGGTCAAGG CGTATGCGAA GGGAACCGCT
CCATCGCAGA GTGTGCCGCT TGCGTGGCTC GGCTCCACAC TGGCGCTCGG CTTGATTTTT
GTAGTCGGAC AGTTCGTAGC GTGGTCGCAG TTGAAAGCCC AGGGCGTATA TCTCGCCACT
AGCCCGAATG CTTCGTTCTT CTATGTGTTG ACGGTGATTC ATGCCATCCA CGTCGCCGGC
GGCTTAGGAG GTTTGACGCG GGTGATCTTG AAGACGAGCG GATCGGTATT CACGCTTCGG
CGCAGCACAC TCGACGGCAC TGCCTACTAC TGGCACTTCA TGGGTGCGCT TTGGATTTAC
GTGGTCTCGC TTCTCTATTT GAAGTTCTAG
 
Protein sequence
MSALNEPLNL AQAVEVERQE RRKTSGGSTV PPSSTSGRLP SIADPAGESV RTGVWVGLAT 
IAMMFAAFTS AVVVRKGASN DWTHIVLPNI LLLNSAVLVA SSITLEIARK KVKAYAKGTA
PSQSVPLAWL GSTLALGLIF VVGQFVAWSQ LKAQGVYLAT SPNASFFYVL TVIHAIHVAG
GLGGLTRVIL KTSGSVFTLR RSTLDGTAYY WHFMGALWIY VVSLLYLKF