| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Acid345_0421 |
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| Symbol | |
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| ID | 4069647 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Candidatus Koribacter versatilis Ellin345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008009 |
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| Strand | + |
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| Start bp | 489050 |
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| End bp | 489850 |
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| Gene Length | 801 bp |
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| Protein Length | 266 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 637982425 |
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| Product | LytR/AlgR family transcriptional regulator |
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| Protein accession | YP_589500 |
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| Protein GI | 94967452 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG3279] Response regulator of the LytR/AlgR family |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.0478257 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 5 |
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| Fosmid unclonability p-value | 0.0270964 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCACGT CATTCGAAAC AGCAGGGATT ATGGAGCGAC AACAGAACCT TCGCGGCATC
CGTGTCGTGC TGGCGTGCAG CGAGCTGTTA AATTGCGCAG CACTGAGACA GGCGCTCGAC
CAACAGTTGG ACGTTTGCGT GGTCGGGAAT GCAACCGACT GGCCTACGCT CGTCTACCAG
ATGAACGAGT TCGTTCCAGA ACTAGTGCTG GCCGGGAACG ATCTCGTCTC ACGGGCCTTG
ATGGAGTTTG GTGGACCTTT CCCGCTGTTC GTTCGGCTCG GAGATTCCAA CCCAATCGAC
TCCTCGAGGG TGATCGCTAC CTTGCCCATG TCCGCTTCTC CCGAGCAGAT CTTCGAGACG
GTGCAACAGA TGAAAGTTGC CGTCCTGGAG GCGAAGTGGA TGGACGTCAT GCAAATGCTT
CAGGCATGCC GGCCCGATGT GGTCGCTCGG CGATATTCGG ACCTCATTGA GATGACCGGC
AAAGACAGTG TCACCAGAGT CCATGCCGAA GACATCCGGT GCATTACGGC GGCGAAGAAC
TATGTTCGGT TGGAAACCAC GTCTGGCGAA TTCCAAACTC GGGCGCCGAT TTCCGAGATC
GGTGCGCGGC TGGACCCGGC GAAATTCATT CGAATCCATC GCTCCGTGAT CGTAAACAAG
CGTGAGATTG CGTCAGTCCT GCGACGTGAA GGCAATTGCG TGGCGGTGAC ACTGCGCAAT
GGAAAGAGAT TTCGCATTGG CAGTACATAT CGTCACGCGA CCACTCAGTT GTTCGACGGT
TCGACCGAAA TCGCCTCCTG A
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| Protein sequence | MATSFETAGI MERQQNLRGI RVVLACSELL NCAALRQALD QQLDVCVVGN ATDWPTLVYQ
MNEFVPELVL AGNDLVSRAL MEFGGPFPLF VRLGDSNPID SSRVIATLPM SASPEQIFET
VQQMKVAVLE AKWMDVMQML QACRPDVVAR RYSDLIEMTG KDSVTRVHAE DIRCITAAKN
YVRLETTSGE FQTRAPISEI GARLDPAKFI RIHRSVIVNK REIASVLRRE GNCVAVTLRN
GKRFRIGSTY RHATTQLFDG STEIAS
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