Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Acid345_0384 |
Symbol | |
ID | 4069205 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Candidatus Koribacter versatilis Ellin345 |
Kingdom | Bacteria |
Replicon accession | NC_008009 |
Strand | - |
Start bp | 435481 |
End bp | 440076 |
Gene Length | 4596 bp |
Protein Length | 1531 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 637982387 |
Product | DEAD/DEAH box helicase-like |
Protein accession | YP_589463 |
Protein GI | 94967415 |
COG category | [R] General function prediction only |
COG ID | [COG1201] Lhr-like helicases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 7 |
Fosmid unclonability p-value | 0.224382 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGACATCCC GCAAACCCAA CCCGCTCGCG CTCTTCCACC CCCCTGTGCG CGACTGGTTC ACCGCCGTCT TCGACGCCCC CACCCGCCCC CAAACCCTCG GCTGGGAGTC CATCGCCCGC GGCGATTCTA CTCTCGTCCT CGCGCCCACC GGCACCGGCA AAACTCTCGC CGCATTTCTT TGGGCCATCA ACCGGGTCAT GTTCGAGCCC GTCCCCGAGA AGAAGCAGCG CTGCCGCATC CTCTACGTCT CGCCGATCAA AGCGCTCGCC GTCGACGTCG AACGCAATCT CCGCGCCCCC ATCGTCGGCA TCGCCCACGC CGCCCGCCGC CTGACCACAT CGTTCCACGA GCCGTCCGTC ATGGTCCGCA CCGGCGACAC CCCCACGGCC GAACGCGTCC GCTTCCAGCG CGAACCCGCT GACATCCTCA TCACCACGCC CGAATCGCTG TATCTCCTTC TCACCTCGAA CGCGCGCGAA GTTCTGCGCT CCATCGAAAC CGTCATCATC GACGAGATCC ACGCCCTCGT CCCCGGCAAG CGCGGCACCC ACCTCAGCCT CTCCCTCGAA CGCCTCGAAC ATCTCTGCGG ACGCCCGCTG CAGCGCATCG GCCTCTCCGC CACGCAGCGC CCCCTCGAAG AGGTCTCGCA CTTCTTAGGA GGCGTGGACA CCGCGAAAGC AAAGCCGGTC ACCGACGAGG CCACCGACGA ACTCCCCTAC CGCCCCGTAA CCATCGTCGA TGCCAGCGCC CCCAAGCGCC TCGACCTCCG CGTCGAAGTC CCTGTCGAAG ACATGGCCTC CCTCGACGAC ATCAACCCGC TGCCCAGTGG CCCAGCATCG CAAGGACCGG TGCGCGGCTC CATCTGGGCC GCGATTCATC CCGAGCTTTT GCGCCTCGTG CAGGAGCACC GCTCCACGCT GATCTTCGTC AACAGCCGCC GCCTCGCCGA ACGCATCTCG GGCGCGATCA ACGACCTTGC CGGTGAATCG CTGGTCCGCG CGCACCACGG CAGCGTCTCC GTCGCGCAGC GCAAAGAGAT CGAAGACCTT CTCAAAGCCG GACAATTGCG CGGTATCGTC GCCACTTCGT CTCTCGAACT CGGCATCGAC ATGGGCGCCG TCGATCTCGT CATCCAGGTC GAAGCGCCGC CGTCCGTCGC CAGCGGCATG CAGCGCATCG GACGCGCCAG CCACCAGGTC GGCGCCGTCA GTAAAGGCCT CATCTTTCCC AAGTACCGCG CGGATTTGCT CGCCTGCGCC GCGGTCACGC GCGCCATGCA GGATGGCGAA GTCGAATCTA TCCGCTACCC GCGCAATCCC CTCGACGTCC TCGCCCAGCA GATCGTTGCC GCCGTCGCGG TTGACCCGTG GAACGTGGAT GACCTCTACG CGTTCGTACG CGGCAGCGCG CCCTTCGCCA CGCTCTCCCG CCCGCTCTTC GACGGCGTGC TCGACATGCT CTCCGGCCGC TATCCCTCCG ACGAATTCGC CGAGCTCCGC CCGCGCATCA ACTGGGACCG CGTGCAGAAC ACGCTCACCC CGCGCCAGGG CTCGAAATCC ATGGCCATCG CCAACGGCGG TACCATCCCT GACCGCGGCC TCTACGGCGT CTTCCTCTCC GGCGCGGAGA AAAAAGGTGG ACGCCTCGGC GAACTCGACG AAGAGATGGT GTTCGAGAGC CGCCCCGGCG AGACCATCAT CCTCGGCGCG ACCACGTGGC GCATCGACGA CATCACTCAC GACCGCGTGC TGGTTTCTCC CGCGCCAGGC GAGCCCGGCA AAATGCCCTT CTGGAAGGGC GATGCCGCCG GACGTCCCGC GGAATTCGGC ACGCGCATCG GCGCCCTCAC GCGGAAGCTG CTGACCACAC CGCGCGGCGC CGCGATCGCG TCGCTGGTCG AATCGCACCG CCTCGATGCC AACGCCGCCG ACAACCTCAT GCGCTACCTC GAAGACCAGC GCGCGGCCAC CGAGAAAGTG CCGTCGGACA AGGACATTCT CGTGGAGCGA TACCGTGACG AACTCGGCGA TTGGCGCGTT TGCGTGCTCA CGCCGTTCGG CAGCCGCGTC CACGCGCCGT GGTGCATCGC CGTCACCGCG AAACTGCGCG CCGATCTCGG CATTGAGCCG GAAAGCATGT GGACCGAGGA CGGCTTCGTC GTGCGCCTGC CGGATTCCGA CGCGCCCCTC GACGTCGAAG CGCTCTTTCC CACCGTTTCG GAGTTCACCG CGCTGGTGAC CGCGCAACTC GGCGGAACCG CGCTCTTCGC CGGAAAATTC CGCGAGGCCG CTGGGCGCGC GCTGCTCCTG CCGCGCCGCC GTCCCGGCCA GCGCACCGCC TTGTGGCAGC AGCGTAAGAA ATCCGCGGAT TTGCTGGCCG TCGCCGCGCG CTACTCCACG TTCCCGCTGC TTCTGGAAAC GTACCGCGAG TGCCTGCGCG ACATCTTCGA CCTCACCGCC GCCACGGATT TACTGCGCGA TATCCAGAAC GGCGCCGTAC AGGTCACCAC CGTCGATTCG CAAAAGCCGT CGCCATTCGC GTCGTCGCTG CTCTTCGGCT ACATCGCGAA TTACATCTAT GAGGGCGACG CGCCGCTGGC CGAACGCCGC GCCCAGGCCC TCTCCATCGA CCAGGCCCAA CTCCAGGATT TGTTGGGCGA TGTTGATTTC CGCGAGCTTC TCGATCCCGC GGTGCTCGAC GAAGTCGAGG CGCAATTACA AATGCGCGAA GCCGAATTCG GCGCGCGCAC CGCCGACGCC CTCCACGATT TGCTGCGCCG CTTAGGCGAT CTCAGCGCGG AAGAACTGGC GCAGCGCGCG GAAGACGGCG TGGATGTTGC GGCGCTGGTC GCGGATTTGG AGCGCCAGCG CCGCGTCGTT CGCGCGACGG TCGCGGGCGC AAAGCGGTAT ATCGCCGTGG AAGACGCGGC CCGCTACCGT GACGCGCTCG GCGTGCCGCT ACCGCCGGGC TTGCCGGACG TATGGCTGGA ACCCGCACAG GACGCGCTTT TGAGCATTTT GCGCCGCTAC GCGCGCACGC ATGGGCCGTT CACCACCGCG CAGGTGGCGG CGCGGTTCGG CGTGGCGGAT TCGCTGGTGG AACCCGCGCT GACCGCGCTC CACGCCGCGG GAAAGCTGCT GGAAGGCGAG TTCCACCCAC GCGGCACGGG TTCGGAGTGG TGCGACCCGG AGGTTTTGCG CATCATCCGT CGCAAGACGC TGGCGCGCCT GCGCAAAGAG GTCGAACCCG TGGATGAAGC CGTGTTTGCG CGGCTGATCA CCCGCTGGCA AGGCGTTTCC GTGCGCCGCC CCGGGCTCGA CGCCGTGCTC GACGCGGTGG AACTCCTCCA AGGCGCGCCC ATCCCCGCGA GCACGCTGGA GCGCGAGATC CTGCCCGCGC GCGTGAAGGA CTACCGGCGC GGCGACCTCG ACACGCTGAT CGCAGGCGGC GAGGTGGTGT GGGTCGGCGT GGAGCGGCTC GGGCGCCGCG ACGGGCGCAT CGCACTCTAC ACCGCGCAAA ACGTGGCAAA ACTGCTGGCT CCCGCGGAAC TGCGGCCATT GCCGCAGTTA TCGGAGCTGG CGCAAAAGCT GCTGGAATTC CTGAAGACGC AGGGCGCGTC GTTCTTCCCC GCGCTGCAAG CGGCGTCGGG CGCGGGATTC TTCGGCGAGA CGCTGGATGC GCTTTGGGAG TTAGTTTGGG CGGGACTGGT GACCAACGAC ACGCTGCAGC CGCTGCGCGC GCTGGTCAGC GGCGGCGACA GCAAGCGCGG CGACGAGCGC AAGAACGGGC GTCCGGAGTC GCTCGGGCGC TCGCGCGGAC GCGCGCCGAA TCCCGCGGGG CAGGGACGGT GGTCGCTGGT GGAAACGCGC ATCGGCGGCA ATTCCGCCGG CGTTACGGAG TGGAGCGCCG CCGTCGCCCA GCAACTCCTC AATCGCTACG GCATTTTGAC GCGCGAAGCG GTGGCGGCCG AGGGAATCCC CGGCGGTTTC AGCTCGGTTT ACCGCACCTT GCGCGCGATG GAAGACAGCG GGCTGGTGCG GCGCGGGATG TTCGTCGGCG GGCTCGGCGG CGCCCAATTC GCGATGAATG CCGCGGTGGA TATGCTGCGG CGGCTGCGCA ACCCGCCGGA GCAGCCGGAA ACGCTACATC TTGCGACCGT CGATCCGGCG AACCCATATG GCGCGATCCT GCCGTGGCCG CGCACCGAGA ACAACGCCAC GCTCTCCCGC ACGGTAGGAA CCAGCGTGGT GCTGGTGAAT GGCGCGCTCG CCGCGTATTT GCGGCGCAGC AGCGAGGAAG TCACGGTGTT CTTGCCGGAG AACGAGCCGG AGCGCAGCGC GACTGCCAGG GCGCTCGCGG GCAAGCTGGC GGAGATCGCG ATCGCGCGGC AGGCATATCG CGCGGGTCTG CTGGTAGGGA CAATCAACGG CGCGCCGGCG GAGAAGCATC TTCTTGGGAG ATTTCTCGAG CAAGCGGGGT TTGTGAAGAC GGCGCTGGGA TACCAGATGC GGCGCGTGGG CGGCCCGCTG GTGGGGAGAG CGGAGCCCGA GGTTGAGGAA GAAGAGTTGG AGTCGGACGA GGCGCAGATC GATTGA
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Protein sequence | MTSRKPNPLA LFHPPVRDWF TAVFDAPTRP QTLGWESIAR GDSTLVLAPT GTGKTLAAFL WAINRVMFEP VPEKKQRCRI LYVSPIKALA VDVERNLRAP IVGIAHAARR LTTSFHEPSV MVRTGDTPTA ERVRFQREPA DILITTPESL YLLLTSNARE VLRSIETVII DEIHALVPGK RGTHLSLSLE RLEHLCGRPL QRIGLSATQR PLEEVSHFLG GVDTAKAKPV TDEATDELPY RPVTIVDASA PKRLDLRVEV PVEDMASLDD INPLPSGPAS QGPVRGSIWA AIHPELLRLV QEHRSTLIFV NSRRLAERIS GAINDLAGES LVRAHHGSVS VAQRKEIEDL LKAGQLRGIV ATSSLELGID MGAVDLVIQV EAPPSVASGM QRIGRASHQV GAVSKGLIFP KYRADLLACA AVTRAMQDGE VESIRYPRNP LDVLAQQIVA AVAVDPWNVD DLYAFVRGSA PFATLSRPLF DGVLDMLSGR YPSDEFAELR PRINWDRVQN TLTPRQGSKS MAIANGGTIP DRGLYGVFLS GAEKKGGRLG ELDEEMVFES RPGETIILGA TTWRIDDITH DRVLVSPAPG EPGKMPFWKG DAAGRPAEFG TRIGALTRKL LTTPRGAAIA SLVESHRLDA NAADNLMRYL EDQRAATEKV PSDKDILVER YRDELGDWRV CVLTPFGSRV HAPWCIAVTA KLRADLGIEP ESMWTEDGFV VRLPDSDAPL DVEALFPTVS EFTALVTAQL GGTALFAGKF REAAGRALLL PRRRPGQRTA LWQQRKKSAD LLAVAARYST FPLLLETYRE CLRDIFDLTA ATDLLRDIQN GAVQVTTVDS QKPSPFASSL LFGYIANYIY EGDAPLAERR AQALSIDQAQ LQDLLGDVDF RELLDPAVLD EVEAQLQMRE AEFGARTADA LHDLLRRLGD LSAEELAQRA EDGVDVAALV ADLERQRRVV RATVAGAKRY IAVEDAARYR DALGVPLPPG LPDVWLEPAQ DALLSILRRY ARTHGPFTTA QVAARFGVAD SLVEPALTAL HAAGKLLEGE FHPRGTGSEW CDPEVLRIIR RKTLARLRKE VEPVDEAVFA RLITRWQGVS VRRPGLDAVL DAVELLQGAP IPASTLEREI LPARVKDYRR GDLDTLIAGG EVVWVGVERL GRRDGRIALY TAQNVAKLLA PAELRPLPQL SELAQKLLEF LKTQGASFFP ALQAASGAGF FGETLDALWE LVWAGLVTND TLQPLRALVS GGDSKRGDER KNGRPESLGR SRGRAPNPAG QGRWSLVETR IGGNSAGVTE WSAAVAQQLL NRYGILTREA VAAEGIPGGF SSVYRTLRAM EDSGLVRRGM FVGGLGGAQF AMNAAVDMLR RLRNPPEQPE TLHLATVDPA NPYGAILPWP RTENNATLSR TVGTSVVLVN GALAAYLRRS SEEVTVFLPE NEPERSATAR ALAGKLAEIA IARQAYRAGL LVGTINGAPA EKHLLGRFLE QAGFVKTALG YQMRRVGGPL VGRAEPEVEE EELESDEAQI D
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