Gene Acid345_0340 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAcid345_0340 
Symbol 
ID4070102 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCandidatus Koribacter versatilis Ellin345 
KingdomBacteria 
Replicon accessionNC_008009 
Strand
Start bp370214 
End bp371173 
Gene Length960 bp 
Protein Length319 aa 
Translation table11 
GC content61% 
IMG OID637982343 
Productcytochrome oxidase assembly 
Protein accessionYP_589419 
Protein GI94967371 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG1612] Uncharacterized protein required for cytochrome oxidase assembly 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.889697 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTCTATC CTTATTTCAT GGCCACCACC GCAGTTGTCG CACCGCCCTC GACCGCCGTT 
CGCCGCATCA CCCAGTTTGC CTGGGGAACG CTGGCTTACA ACATTGCGGT GATCGTGTGG
GGCGCCTATG TGCGCGCCAC CGGCGCGGGT GCGGGATGCG GGAACCACTG GCCACTCTGT
AATGGCGAGG TCATCCCGCG CGGGGCGAGG ATCGAGACCC TGATTGAGTT TTCGCATCGC
GCCAGTAGCG GGATTGCCGC GATTCTTGTG CTGGCGTTGC TGGTGTTGTG CTGGCGAGCC
TTGCCAAAGC GACACCCAGC GCGCGTTATG GCCGTTGCCG CGGCATTTCT GATGTTGAGC
GAAGCTCTCC TGGGCGCGAT GCTGGTGAAG CTGGCGCTGG TGGCACAAGA CAAGTCGGCG
ATGCGCGCCA TCTCGCTGCC CATCCATTCG ACCAATACCA TGCTGCTGCT GGCGGCAATT
GCCGCGACCG CGGTGTGGCT GCCGCTGGAT GGATCGAGCG TCCGCTGGAA CACAAAGCGG
CTGTGGCTCA CGATTGCAGC GCTGGCGATG CTGTTGATCA CAGCCGCGGC CGGCGTCATC
GCTGCGCTCG GCGACACACT ATTTCCTAAC GCAACGATTT CCGCCGATTT TTCGCCGACG
AGCCACTTCC TCATCCGGCT GCGAATCCTT CATCCTGCAC TGGCGCTGCT GTCGACGATC
ATCGTCGCGG TTTTCGTGTC ACTCACCACC CGAACCCACG AGCGCGCCAA GCGATTTGCG
GGACTGGTCG GGATCGCAAT CGTCACCCAG CTCTTTCTCG GGATCATGAA CATCGCGCTG
CAAGCCCCAG TGTGGCTGCA AATGCTGCAC CTTGGCGTTG CCGACCTGGT TTGGATTGGG
ACCGTGCTAG TGGCGGCGGA ATCTTTGGTC TCCGCAGAAA ATTTTTCTCT TCTCGCTTGA
 
Protein sequence
MVYPYFMATT AVVAPPSTAV RRITQFAWGT LAYNIAVIVW GAYVRATGAG AGCGNHWPLC 
NGEVIPRGAR IETLIEFSHR ASSGIAAILV LALLVLCWRA LPKRHPARVM AVAAAFLMLS
EALLGAMLVK LALVAQDKSA MRAISLPIHS TNTMLLLAAI AATAVWLPLD GSSVRWNTKR
LWLTIAALAM LLITAAAGVI AALGDTLFPN ATISADFSPT SHFLIRLRIL HPALALLSTI
IVAVFVSLTT RTHERAKRFA GLVGIAIVTQ LFLGIMNIAL QAPVWLQMLH LGVADLVWIG
TVLVAAESLV SAENFSLLA