Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Acid345_0300 |
Symbol | |
ID | 4070521 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Candidatus Koribacter versatilis Ellin345 |
Kingdom | Bacteria |
Replicon accession | NC_008009 |
Strand | + |
Start bp | 321148 |
End bp | 321792 |
Gene Length | 645 bp |
Protein Length | 214 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 637982301 |
Product | TetR family transcriptional regulator |
Protein accession | YP_589379 |
Protein GI | 94967331 |
COG category | [K] Transcription |
COG ID | [COG1309] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.948594 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.297799 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGCCCAGAC TTGTTCGAAC CGCGTTACAG CCGCGAAAAA CGCCAGTGCA AGCACGTTCA GCAGTGACGG TCGACGCAAT TTTGGAGGCC GCCATTCAGG TTCTGGTGGA CGCCGGCAAA GAGCGGCTGA CTACGACGCA GGTCGCGTAC CACGCCGGGG TTTCCGTAGG CACACTCTAC CAATACTTTC CCAACAAGAG CGCGCTGTTG CAGGCGGCCT TGAGGCGGCA CCTTGAGAGT GTAAGCGCGG AAGTGCTGAA GGTGTGCGAA GAGTATCGCT CCATGGGCTT GCTGGAGATG GGTGCTGCCG TGGTGGACGT CTACATCGAT GCGAAGATGC GTCACGTGAA AGAGAGTGCG GCGCTCTATG CGGTGAGTTC TGACGTGGAT GGCATGGCGA TCGCGAAAGC TGCGGCGGCG CGCGCACGGC GGTCGCTGGT CGAGTTGTTT GTCACGGCGA AGGAAGGGCT GAGGAAAGAC CCCGAACTTA TCGCGACGAG CGTGTCGGCA GCCATGAATG GATTCGCACG AGCGCTGCTG GAGTCGAAAT CGCCGGAGCG GGAAGTGGAA ACACTGCGTG GGGAGTTGCT GGCGCTTGTA CAAGCGTACC TGCGTACGTG CGTGAAATCG CCGATTACGA TTTAG
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Protein sequence | MPRLVRTALQ PRKTPVQARS AVTVDAILEA AIQVLVDAGK ERLTTTQVAY HAGVSVGTLY QYFPNKSALL QAALRRHLES VSAEVLKVCE EYRSMGLLEM GAAVVDVYID AKMRHVKESA ALYAVSSDVD GMAIAKAAAA RARRSLVELF VTAKEGLRKD PELIATSVSA AMNGFARALL ESKSPEREVE TLRGELLALV QAYLRTCVKS PITI
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