Gene Acid345_0300 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAcid345_0300 
Symbol 
ID4070521 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCandidatus Koribacter versatilis Ellin345 
KingdomBacteria 
Replicon accessionNC_008009 
Strand
Start bp321148 
End bp321792 
Gene Length645 bp 
Protein Length214 aa 
Translation table11 
GC content60% 
IMG OID637982301 
ProductTetR family transcriptional regulator 
Protein accessionYP_589379 
Protein GI94967331 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.948594 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.297799 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGCCCAGAC TTGTTCGAAC CGCGTTACAG CCGCGAAAAA CGCCAGTGCA AGCACGTTCA 
GCAGTGACGG TCGACGCAAT TTTGGAGGCC GCCATTCAGG TTCTGGTGGA CGCCGGCAAA
GAGCGGCTGA CTACGACGCA GGTCGCGTAC CACGCCGGGG TTTCCGTAGG CACACTCTAC
CAATACTTTC CCAACAAGAG CGCGCTGTTG CAGGCGGCCT TGAGGCGGCA CCTTGAGAGT
GTAAGCGCGG AAGTGCTGAA GGTGTGCGAA GAGTATCGCT CCATGGGCTT GCTGGAGATG
GGTGCTGCCG TGGTGGACGT CTACATCGAT GCGAAGATGC GTCACGTGAA AGAGAGTGCG
GCGCTCTATG CGGTGAGTTC TGACGTGGAT GGCATGGCGA TCGCGAAAGC TGCGGCGGCG
CGCGCACGGC GGTCGCTGGT CGAGTTGTTT GTCACGGCGA AGGAAGGGCT GAGGAAAGAC
CCCGAACTTA TCGCGACGAG CGTGTCGGCA GCCATGAATG GATTCGCACG AGCGCTGCTG
GAGTCGAAAT CGCCGGAGCG GGAAGTGGAA ACACTGCGTG GGGAGTTGCT GGCGCTTGTA
CAAGCGTACC TGCGTACGTG CGTGAAATCG CCGATTACGA TTTAG
 
Protein sequence
MPRLVRTALQ PRKTPVQARS AVTVDAILEA AIQVLVDAGK ERLTTTQVAY HAGVSVGTLY 
QYFPNKSALL QAALRRHLES VSAEVLKVCE EYRSMGLLEM GAAVVDVYID AKMRHVKESA
ALYAVSSDVD GMAIAKAAAA RARRSLVELF VTAKEGLRKD PELIATSVSA AMNGFARALL
ESKSPEREVE TLRGELLALV QAYLRTCVKS PITI