Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Acid345_0283 |
Symbol | |
ID | 4068827 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Candidatus Koribacter versatilis Ellin345 |
Kingdom | Bacteria |
Replicon accession | NC_008009 |
Strand | - |
Start bp | 295942 |
End bp | 296664 |
Gene Length | 723 bp |
Protein Length | 240 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 637982284 |
Product | GntR family transcriptional regulator |
Protein accession | YP_589362 |
Protein GI | 94967314 |
COG category | [K] Transcription |
COG ID | [COG2188] Transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCAACCA TTCGCAAGAA CGGGACCCCG GCGTACAAGC GCATCCAGGA CACGATCCTG AAGCGCATTG AGCGGGGCGA ACTGAAGCCG GGCGATGCGG TGGAGTCCGA GCGTTCGCTG GCGCGTCTGC ACGACGTGAG CCTGATGACG GCGCGTCACG CCCTGGTGGG GCTGGAGCGC GAGGGCCTTG TAGAACGAAG GCATGGCGCG GGAACGTTTG TCGCGGCACC GAAAATCCAC TTCAACAAGC TCACCAGTTT CAGCGAACAA CTGGCAGCGC GCAGCCTCGA TTCCGCTTCG CGCGTGGTTG CGCTCAAGGT CGTGGACGAT GAAGACGAGA TCGCCGCGCG TCTTTCCCTG CCGGGAGCGA GCCGGCTGCT GCGAATCGAA CGGGTACGGC TTGGATCCGG CGAACCGTTT GCCGTGGAGA GTTGCTACTT GTCGGCGGAA GACTTTCGCG GCGTATCGCG GCAGGCGCTG GAGCGCGGAT CGCTCTTTAC CTTGATGGAG AAGGAATACG GCATCACCAT CGCGCATGCC GACGAGGAAA TTGATGCGAC CGGTGCGGAC CCTGATCTCG CGCGGTTGCT CGCGGTTCCC AAGGGATATC CTGTATTGCG CATTCGTCAG ACGATCTATT CCACGCAGGG CAAGCCGATT TTGTATGTGC TCGGCATGTA CCGCGCCGAC CGCCACGTGT TGCGGATCAG GCGCTATCGT TAG
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Protein sequence | MPTIRKNGTP AYKRIQDTIL KRIERGELKP GDAVESERSL ARLHDVSLMT ARHALVGLER EGLVERRHGA GTFVAAPKIH FNKLTSFSEQ LAARSLDSAS RVVALKVVDD EDEIAARLSL PGASRLLRIE RVRLGSGEPF AVESCYLSAE DFRGVSRQAL ERGSLFTLME KEYGITIAHA DEEIDATGAD PDLARLLAVP KGYPVLRIRQ TIYSTQGKPI LYVLGMYRAD RHVLRIRRYR
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