Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Acid345_0277 |
Symbol | |
ID | 4068821 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Candidatus Koribacter versatilis Ellin345 |
Kingdom | Bacteria |
Replicon accession | NC_008009 |
Strand | - |
Start bp | 287596 |
End bp | 288270 |
Gene Length | 675 bp |
Protein Length | 224 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 637982278 |
Product | YbbR-like protein |
Protein accession | YP_589356 |
Protein GI | 94967308 |
COG category | [S] Function unknown |
COG ID | [COG4856] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.322276 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATCCACT GGCTGCGCAC CCATGTGTTT GGGCACATCT GGCTGAAGAT CGTTTCGATC CTGATTGCGC TGTTGTTGTG GTGGGCCGTG GCGCACGACC AGCCGGCGGA AATCGCGTTG AGCGTGCCGA TCGAGTTCTA CAACACGCCG GAGCACCTGG AAATCAGCAG CGAGCGTATC CAGCGGGCCG AGATCCGCGT GCAGGGGCCG GCGCGCATTC TGCGCCAGAT GACGAACGCC GACATTGATG CGGTGATCGA TCTCGCAGGG GCGCACGTGG GAGAACATAC GTTCGACCTC ACGCCGAAGC AAATCCGTCA CCTGCCGCAC AACGTGAACA TTGTGCAGGT AGTGCCGTCG CAGATCCGGC TCGACCTCGA CCGCAGCGCG TCGAAGGTGG TGGATGTAAC GCCGCGGGTG ATTGGCACAT TTGCGGCGGG CTACAGGCTG GGCGATGTGG AAGTGAATCC GGCGAAGATT ACGATCGTCG GGCCACAGTC GCGTTTGAAC AATATTGACG CCGCGATCAC GGACCCAGTG GATGCCACCG GGCTCGTGGG ACGTGGTACT TTCACTACAC AGGCTTTTGT CGGCGACCCT CTCGTCCAAC AGCTGAATCC TGAGCCTATC CACGTCACCG TTTCAACGAC GAAGACCAAG CCTGGGGAGA AGTAG
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Protein sequence | MIHWLRTHVF GHIWLKIVSI LIALLLWWAV AHDQPAEIAL SVPIEFYNTP EHLEISSERI QRAEIRVQGP ARILRQMTNA DIDAVIDLAG AHVGEHTFDL TPKQIRHLPH NVNIVQVVPS QIRLDLDRSA SKVVDVTPRV IGTFAAGYRL GDVEVNPAKI TIVGPQSRLN NIDAAITDPV DATGLVGRGT FTTQAFVGDP LVQQLNPEPI HVTVSTTKTK PGEK
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