Gene Acid345_0277 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAcid345_0277 
Symbol 
ID4068821 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCandidatus Koribacter versatilis Ellin345 
KingdomBacteria 
Replicon accessionNC_008009 
Strand
Start bp287596 
End bp288270 
Gene Length675 bp 
Protein Length224 aa 
Translation table11 
GC content60% 
IMG OID637982278 
ProductYbbR-like protein 
Protein accessionYP_589356 
Protein GI94967308 
COG category[S] Function unknown 
COG ID[COG4856] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.322276 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCCACT GGCTGCGCAC CCATGTGTTT GGGCACATCT GGCTGAAGAT CGTTTCGATC 
CTGATTGCGC TGTTGTTGTG GTGGGCCGTG GCGCACGACC AGCCGGCGGA AATCGCGTTG
AGCGTGCCGA TCGAGTTCTA CAACACGCCG GAGCACCTGG AAATCAGCAG CGAGCGTATC
CAGCGGGCCG AGATCCGCGT GCAGGGGCCG GCGCGCATTC TGCGCCAGAT GACGAACGCC
GACATTGATG CGGTGATCGA TCTCGCAGGG GCGCACGTGG GAGAACATAC GTTCGACCTC
ACGCCGAAGC AAATCCGTCA CCTGCCGCAC AACGTGAACA TTGTGCAGGT AGTGCCGTCG
CAGATCCGGC TCGACCTCGA CCGCAGCGCG TCGAAGGTGG TGGATGTAAC GCCGCGGGTG
ATTGGCACAT TTGCGGCGGG CTACAGGCTG GGCGATGTGG AAGTGAATCC GGCGAAGATT
ACGATCGTCG GGCCACAGTC GCGTTTGAAC AATATTGACG CCGCGATCAC GGACCCAGTG
GATGCCACCG GGCTCGTGGG ACGTGGTACT TTCACTACAC AGGCTTTTGT CGGCGACCCT
CTCGTCCAAC AGCTGAATCC TGAGCCTATC CACGTCACCG TTTCAACGAC GAAGACCAAG
CCTGGGGAGA AGTAG
 
Protein sequence
MIHWLRTHVF GHIWLKIVSI LIALLLWWAV AHDQPAEIAL SVPIEFYNTP EHLEISSERI 
QRAEIRVQGP ARILRQMTNA DIDAVIDLAG AHVGEHTFDL TPKQIRHLPH NVNIVQVVPS
QIRLDLDRSA SKVVDVTPRV IGTFAAGYRL GDVEVNPAKI TIVGPQSRLN NIDAAITDPV
DATGLVGRGT FTTQAFVGDP LVQQLNPEPI HVTVSTTKTK PGEK