| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Acid345_0245 |
|---|
| Symbol | |
|---|
| ID | 4073095 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Candidatus Koribacter versatilis Ellin345 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008009 |
|---|
| Strand | - |
|---|
| Start bp | 258339 |
|---|
| End bp | 259106 |
|---|
| Gene Length | 768 bp |
|---|
| Protein Length | 255 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 637982246 |
|---|
| Product | TonB-like protein |
|---|
| Protein accession | YP_589324 |
|---|
| Protein GI | 94967276 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0810] Periplasmic protein TonB, links inner and outer membranes |
|---|
| TIGRFAM ID | [TIGR01352] TonB family C-terminal domain |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 0.854856 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 12 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGCGAGTGG AAGAGAAGGA GCACACCATG TTTGAGCAGA GCCTGGTCGA AATCTCCGCG
GAGACGAAAC GCCGGAAGCG CTGGACGCAA CTGATTTCGT ATTCGCTCGA AGCCACCGCA
GTCGTCGTAT TGCTCGCGTT TCCGCTGGTG CATACGGAAG CGTTGCCACT GGACGACAGT
CCCAAGATCT TCCCGCCGAT TTATCACGCG CCGCCGCATG TGGATGTGAT CACGGAGCAC
GCGCCTGCAC CGCGCCCGGT TCGCGACAAT CACGTAATGA TCAATCCATA CTTGGCGCCA
ACCAGCGTCG GAAAGACGAT TGATCGCAGT CACGATGCCG ACAAGTATTC CGCCGCCGAA
GAGCTTGTAT GCGTCGGTTG CATTCCAGAT CCAACCGGTA CCGATAGCAG CCGTCATAAC
CCCGTTCTCG AAAGTGTGCT GCGTCCTGGC CCGGTGCAAC CGACGCATCG CGCAGCGCCG
GTGACTCGCA CTTCGAAATC GCAGGAGAGC CTGCTGCTCC GCCAGGTAAA ACCCACTTAC
CCACGCATGG CGGTCATGAC GCGGACGCAG GGAGTCGTGC AACTGCACGC GATCATCGGC
CGCGACGGCT CGATCCAGCA GTTGCAGGTT GTGAGCGGAT CTCCGTTCTT AGTCCAGGCA
GCGCTCGAGG CGGTGCAGCA GTGGAAGTAT CGGCCGTATC TGCTCAACGG TGAGCCTGTG
GAGGTGGAAA CGCAGATCAC CGTGAATTTC ACGCTAAATG GGAATTAA
|
|---|
| Protein sequence | MRVEEKEHTM FEQSLVEISA ETKRRKRWTQ LISYSLEATA VVVLLAFPLV HTEALPLDDS
PKIFPPIYHA PPHVDVITEH APAPRPVRDN HVMINPYLAP TSVGKTIDRS HDADKYSAAE
ELVCVGCIPD PTGTDSSRHN PVLESVLRPG PVQPTHRAAP VTRTSKSQES LLLRQVKPTY
PRMAVMTRTQ GVVQLHAIIG RDGSIQQLQV VSGSPFLVQA ALEAVQQWKY RPYLLNGEPV
EVETQITVNF TLNGN
|
|---|
| |