| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Acid345_0151 |
|---|
| Symbol | |
|---|
| ID | 4069736 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Candidatus Koribacter versatilis Ellin345 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008009 |
|---|
| Strand | + |
|---|
| Start bp | 159967 |
|---|
| End bp | 160413 |
|---|
| Gene Length | 447 bp |
|---|
| Protein Length | 148 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 57% |
|---|
| IMG OID | 637982151 |
|---|
| Product | biopolymer transport protein ExbD/TolR |
|---|
| Protein accession | YP_589230 |
|---|
| Protein GI | 94967182 |
|---|
| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG0848] Biopolymer transport protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.00378498 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 4 |
|---|
| Fosmid unclonability p-value | 0.00575994 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGTCAATGA ATGTTGGCGG GTCTGGTGGA GGACCCACAG CGGACATGAA CGTGACCCCG
CTGATCGACG TCTTGCTGGT GTTGCTCATC ATCTTCATGG TGATCACGCC GCTGACGCCG
AAAGGCTTGG ATGCACTCGT ACCACAACCA CCGCCGAAAG ATCAGAAGCA GCAACCGCCG
CCGCCCGAAC GGACCATCGT GGTACAGGTG ATCAAGTCGG GTGACCCGGA TCGGCCGACC
CTCAAGATTA ATCAGGACGA AGCGAACTAC GATAATCTTG AAGGCCGTCT GCGTGACATC
TTTGCGAGCC GCGCCGAGAA GGTGATGTTC GTGAAGGGTG ACGACGACAT TTCGTTTAGC
AGTGTCGCCC AGGTCATCGA TATCGCGCAC TCCGCGGGTG TCGACAAGGT TGGTCTCATT
ACTGCCAAGA TCGAGGCCGG ACAATAG
|
|---|
| Protein sequence | MSMNVGGSGG GPTADMNVTP LIDVLLVLLI IFMVITPLTP KGLDALVPQP PPKDQKQQPP
PPERTIVVQV IKSGDPDRPT LKINQDEANY DNLEGRLRDI FASRAEKVMF VKGDDDISFS
SVAQVIDIAH SAGVDKVGLI TAKIEAGQ
|
|---|
| |