Gene Acid345_0024 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAcid345_0024 
Symbol 
ID4071729 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCandidatus Koribacter versatilis Ellin345 
KingdomBacteria 
Replicon accessionNC_008009 
Strand
Start bp24743 
End bp25183 
Gene Length441 bp 
Protein Length146 aa 
Translation table11 
GC content57% 
IMG OID637982024 
Producthypothetical protein 
Protein accessionYP_589103 
Protein GI94967055 
COG category[S] Function unknown 
COG ID[COG1576] Uncharacterized conserved protein 
TIGRFAM ID[TIGR00246] rRNA large subunit m3Psi methyltransferase RlmH 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.820161 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGCTCC GCGTTGTGTG GATCGGCAAG ACCAAAGAAT CCGCCATCCA AACCCTTACC 
GGCGAATATC TCAAGCGGCT GTCGCGTTAC GTCGCGACGG AGGGGCTTGA GATTGGCTCG
GAAGAAGCAC TGCTCAAGTT GAAGGACCGA CCGGGGCGGA CCGCTCCCGT GCTTGTTCTG
ATGGATGAGC GCGGCAAGCA GGTGGGATCC GAAGAGCTAG CTAATTTTCT TGGCTATCAT
CGCGACCAGG GTGTGCAGGA CCTGATTTTT GCGATTGGGC CTTCTGACGG CTGGCAGAAA
GAAACGCTAA AATCCGCCAC CCAAGTCCTC TCGATGGGCA AAATGACCCT GCCGCACGAG
CTTGCCCGGG TGGTGCTGCT GGAGCAGCTT TACCGGGGCT ACACCATTCT TACGGGACAT
CCTTACCACG GTGGACACTG A
 
Protein sequence
MKLRVVWIGK TKESAIQTLT GEYLKRLSRY VATEGLEIGS EEALLKLKDR PGRTAPVLVL 
MDERGKQVGS EELANFLGYH RDQGVQDLIF AIGPSDGWQK ETLKSATQVL SMGKMTLPHE
LARVVLLEQL YRGYTILTGH PYHGGH