| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_5933 |
|---|
| Symbol | |
|---|
| ID | 4042797 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cupriavidus metallidurans CH34 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007974 |
|---|
| Strand | + |
|---|
| Start bp | 136637 |
|---|
| End bp | 137380 |
|---|
| Gene Length | 744 bp |
|---|
| Protein Length | 247 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 637981352 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_588061 |
|---|
| Protein GI | 94314852 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 33 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 26 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCGTCTA TCCTCACCAA AGCCCGGCTG TTGGGGCTGG CGGCCTGTCT GCTGCCAACC
GTTCTCCACT GCGTGCCGGT ACGCGCGCAG ACGGTGGAGC CGGGGGTTGT ATTCTCAACG
GCCCGGCCCG GCAGCGGGCT GCCGAGCGGA TGGCAGAACA GGCCGGTCTT GCCCGGAAAA
AAGATGACCA GCTATGTGCT GGTGGCGGAC CAAGGTACCA CGGTGCTCGA AGCCGATGCC
AGCGGCTCGG CATCCGGGCT GGTACACGAG GGCGACTTCG ATCTGAACAA GACACCGGTC
GTCTCGTGGC GCTGGAAGGT GGCCGCGCCG ATCCAGAATG CCGACAATCG CGTGGCCGAC
CGCGAGGACT CGCCCGCACG GCTCGTGTTC TTCTTCGGCG GTCAGGTCGA CAGCCTGTCG
ATTGGCGATC GCGCAGAGAT GTTCGCGGCC CATGCCCTGG GCGAGAGTCT GCCTTACGCC
ACGTTGATGT ACATCTGGAC CAACAGCGCC GCGCCCGGTA CCGTCATCGA GAATCCCCAT
TCCAGCCGGG TGCAGATGAT CGTGGTTGGT AACGAGGCGG GCAAATGGCA GAGCCTGCGC
CGCAATGTCG TCGCCGATTT CGAGAAAGTC TTTCATGAGA AGCCCGGCAA GCTGACCGGC
TACGGCATCC TGACCGATAC CGACAACACG GGCGGCGTGG CACGCGCCTG GTACGGCGAT
ATCAGGTTCT CGCCGCAGAA CTAG
|
|---|
| Protein sequence | MPSILTKARL LGLAACLLPT VLHCVPVRAQ TVEPGVVFST ARPGSGLPSG WQNRPVLPGK
KMTSYVLVAD QGTTVLEADA SGSASGLVHE GDFDLNKTPV VSWRWKVAAP IQNADNRVAD
REDSPARLVF FFGGQVDSLS IGDRAEMFAA HALGESLPYA TLMYIWTNSA APGTVIENPH
SSRVQMIVVG NEAGKWQSLR RNVVADFEKV FHEKPGKLTG YGILTDTDNT GGVARAWYGD
IRFSPQN
|
|---|
| |