| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_5905 |
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| Symbol | |
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| ID | 4042769 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cupriavidus metallidurans CH34 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007974 |
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| Strand | - |
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| Start bp | 105084 |
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| End bp | 106037 |
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| Gene Length | 954 bp |
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| Protein Length | 317 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637981324 |
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| Product | LysR family transcriptional regulator |
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| Protein accession | YP_588033 |
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| Protein GI | 94314824 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 0.572512 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.559463 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGATCTCA ACGCCCTGCG CCTGTTCGTC GATATCGTCG ACGCTGGCAA TCTCAGCGCC
GCCGCGCGCA AGCTCAAGAT GACGCGCGCC AACGTCAGCT ACCACCTCAA GGCTCTGGAG
GAGGAACTCG GCGTGCAACT GCTGCGCCGG ACGACCCGGC ACGTGGAACC GACGCCGGTG
GGCGCCGGAC TGTACGAGCA CGGCAAAAAC ATCCTGGGCG AAGTGGCTGC GGCCAACGCG
CTGATCAGCA GCATGGGCAA GAGCCTCCAG GGCCATGTGC GGCTGTCGGT ACCCACCGGT
CTGGGTCACA CGATGATCTC GCCGCTGCTG GTGCGCTTCA AGCAGCGCTA TCCCGATATC
ACGCTCGACG TCGTCTTTGA CAACCGCATC CACAACCTCG TCTCCGAGGA TGTGGAAGTG
GCGTTGCGCA TCATCTCCAC GCCTCCCGAC TCGGTCGTTG CCACCGAAAT CGGCGGGGTG
GACTGGCTGC TTTGCGCCGC GCCGTCGTAT CTGGCCGGAC GCACGCCGCC CGCGCACCTT
GCCGACCTGA CGACCCATGC GATCGTGTGC GCGTCGCCGA TCGGGCAGAA ACTCAAGGTG
TCAGGCACGC GCGACGGCAC CGCCGACCGC GAACAGGTGG TACTGGAGCC AACCCTGAGC
TCCGAGAACT TCGCGTTCCT CAAGGAGGCC GTGGTCGGCG GGCTCGGCAT CGGCATTTTT
CCGCTCTATG CGGTGGACAA GGAACTGGCC AGCGGCGCGC TGGAATCGCT GCTCGGCGAC
TATCAGATCA GCGCGTTCGG CAGCAAGCTG TACATGCTGA CCATGCCCAA TCGCTACCAG
ACCATGGCAA CGCGCTACCT GCTTACGTTC CTGAGAACAG AGCTGCAGGC GATCTGGCCG
CGCATTCGTG CCGGCGGTGC CGACAGTGCC TATAGTGAGA ACACTCAGGA CTAA
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| Protein sequence | MDLNALRLFV DIVDAGNLSA AARKLKMTRA NVSYHLKALE EELGVQLLRR TTRHVEPTPV
GAGLYEHGKN ILGEVAAANA LISSMGKSLQ GHVRLSVPTG LGHTMISPLL VRFKQRYPDI
TLDVVFDNRI HNLVSEDVEV ALRIISTPPD SVVATEIGGV DWLLCAAPSY LAGRTPPAHL
ADLTTHAIVC ASPIGQKLKV SGTRDGTADR EQVVLEPTLS SENFAFLKEA VVGGLGIGIF
PLYAVDKELA SGALESLLGD YQISAFGSKL YMLTMPNRYQ TMATRYLLTF LRTELQAIWP
RIRAGGADSA YSENTQD
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