Gene Rmet_5875 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRmet_5875 
Symbol 
ID4042739 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCupriavidus metallidurans CH34 
KingdomBacteria 
Replicon accessionNC_007974 
Strand
Start bp71186 
End bp72658 
Gene Length1473 bp 
Protein Length490 aa 
Translation table11 
GC content64% 
IMG OID637981294 
Producthypothetical protein 
Protein accessionYP_588003 
Protein GI94314794 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGAAGC GCTCGCTGCA GGGCATTGGT CTTGCCAGTT GCTCTACGAT GTGCCTGCTT 
GGCGGCATGG CTCATGCGCA GACTCCGCCC GACGATGGGC CGCCGGCGGC CGCCAAGCTC
GAAACGCTGC AGAAGGAACT GACCGAACAG GCGAAGCAGC TGGAGGCGAT GAAACGGGCG
CTGGCCGAAC AGGAGGCCAC GATCCGCGAA CTGCGCAGCA CGGTGGATAG CGAATCGCTG
GCGCGCAAAC GTGGTGGCCA GGCCGGGGTA GGCACCGGCG TGACGCCGAG CAACATGGCG
ACCAATGCCG CCGCGGCCGC CGCGGGCGCC AGCGCCACAC AGATCAACAG CACGGCCCAG
CAAGGCGTAC AGGCCCAACA GGCGCCATCC GACGCGCCGC CGCAGGCCGT GGCGCCACAG
AACGTGCAGC AGGGCCAGGC CGCGCAGGGC GACCAGCAAG GCGAGTCCGC CGCGGGTCCC
GAACAACCGG TGGGCAGGCC GCCGGAGCGC GATACGCGTC CACCAGAGAT CGCGCCAATC
TTCGACCAGC CTGGCGTACT CACGCCCCAG GGCAAGATCG TGATCGAACC GAGCTTCCAG
TACGGCTACT CGTCGAGTGA CCGCGCGGTA CTGGTCGGCT ACACGGTGAT TCCCGCGCTG
CTGATCGGCC TGATCGACGT GCGCGAGATC AAGACGTCGA CGTACATCAC GTCCATGGCC
TTCCGCTACG GCATTACCAA GCGTCTCGAG ATCGAAGCCA AGGTGCCGTA CGTGCATTCG
AGCAGCGATA CCGTCAGCCG CGAAATCTTC ACCGGCACCG CCGTCGACAA CGCCTTCAAT
GCGAGCGGCA GCGGCCTGGG CGACGTTGAG GCGACGTTGC GCTACCAGCT CAACTACGGC
AACGAGAAGA TGCCGTACTT CATCGGCTGG CTGCGCTACA AGTCGAACAC CGGCAAGGAT
CCGTTCGAGG TGGTGACCGA TTGCGTGACC CGTTGTGTCA GCAACACTAC CGGCACCGGG
TTGCCGCTGG GCATGCCGAC CGGCACCGGC TTCCAGGCAA TCCAGCCGGG CGTCACGTGG
CTGTTGCCGA CCGATCCGGC GGTGTTCTTT GGTACCTTCA GCTACCTGCA CAACTTCGCG
CGTGACAACA TCTATCGCAC CGTGCTGAAC GGCCAGCAGG AATTCCTCGG CAAGATCGCA
CCGGGAGACA TCTTCGAGTT CAACTTTGGC ATGGGCCTGT CGCTCAACGA GCACGCGTCG
TTCAGTATCG GCTACGACCA GAGCATCATC TGGCCGACCA AGCAGAACGG GCAGACCGTC
CCAGGCTCCG TGCGCATCAC GCAGGGCACG CTGCTCGTGG GCTACTCCTA TCGCTTCAAC
AACCGGTACA CACTGAACCT TTCGGTGGGC GCGGGCCTGA CGCGAGACAC ACCGGATCTG
ACGGTGACGG TGCGTCTACC GATCACATTC TGA
 
Protein sequence
MKKRSLQGIG LASCSTMCLL GGMAHAQTPP DDGPPAAAKL ETLQKELTEQ AKQLEAMKRA 
LAEQEATIRE LRSTVDSESL ARKRGGQAGV GTGVTPSNMA TNAAAAAAGA SATQINSTAQ
QGVQAQQAPS DAPPQAVAPQ NVQQGQAAQG DQQGESAAGP EQPVGRPPER DTRPPEIAPI
FDQPGVLTPQ GKIVIEPSFQ YGYSSSDRAV LVGYTVIPAL LIGLIDVREI KTSTYITSMA
FRYGITKRLE IEAKVPYVHS SSDTVSREIF TGTAVDNAFN ASGSGLGDVE ATLRYQLNYG
NEKMPYFIGW LRYKSNTGKD PFEVVTDCVT RCVSNTTGTG LPLGMPTGTG FQAIQPGVTW
LLPTDPAVFF GTFSYLHNFA RDNIYRTVLN GQQEFLGKIA PGDIFEFNFG MGLSLNEHAS
FSIGYDQSII WPTKQNGQTV PGSVRITQGT LLVGYSYRFN NRYTLNLSVG AGLTRDTPDL
TVTVRLPITF