Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rmet_5853 |
Symbol | |
ID | 4042717 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cupriavidus metallidurans CH34 |
Kingdom | Bacteria |
Replicon accession | NC_007974 |
Strand | - |
Start bp | 47677 |
End bp | 48909 |
Gene Length | 1233 bp |
Protein Length | 410 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 637981272 |
Product | putative glycosyl transferase |
Protein accession | YP_587981 |
Protein GI | 94314772 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0438] Glycosyltransferase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.0350572 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 0.772659 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACGATAC CCAACACCCT CGGTCCCATC GCCCGGCAGC CAGTCGACGA TGACATCCCG CCATCGCCGG CGCAGTCTCT CGCGCAGGCT GGCGCACCAT CAACAGTTGC GCGGCCAGTG CTGTTCCTCG GGCCGCTTCC GCCGCCACAT CACGGCTTCT CCGCGTCGAA CCAACGCATG GTGGACCAGA TTCGCCAGCA CGCGCCAGTC GTGGTGCTGG ACGTCGCGCC ACGGGCGTCC GGCCGGTTCG GCGGCCGGCT TGGCGGTTTA CAGGCGCTAG GCAATCGCGC ACGGCAACTC TGGCGCATGG TCCGGCTCGT GACGAACCGC AAGCCCGGCA ACCGGCCGCA TACGCTGTAC ATGGGGCTCT CGGGCGGCCT TGGCCAACTG CTCGACGCGC CTTTCGTGGC ACTGGCGCAC TGGTCTGGCA TGGACATCTA CTTCCATCAT CACAGCTTCG CGTACATCAA CCGGCCCACG TGGTACACGC GCCTGATCCT GCGTTGCGCG CCGCGCGGCA GGCATCTGAC GCTGTGCGAC CGGATGCGCG CGGAGCTGGC CCGCCTCTAC CGGCTGACCC CGGACCGTGT CCAGGTACTG TCCAACCTGA GCCTCATCGA CCTGCCTGCA ACGACATCGA CAGAGGCACC GGCTCGCCGG CATTCGGAAG CGATCAACGT CGGCTTCCTG TCGAACATCA CCGCCGCCAA GGGCATCTTC ACATTCCTGG AGGTAGTGCG ACTGGCGCAG GAGATCGGCA TCCCGGTTTG CGCCCGGATC GCAGGGCCAG TGGCACGCCA TATCCGCGCG AGGTTCGACA CGGAACTGGC CCGCACGCCC TGCACGCGCT ACCTCGGTCC GATTCATGGC ACGGAGAAGG AGGCGTTCTT CCAGGATATC GACGTGCTGA TGTTCCCGAC GACCTATCAC AACGAAGCAG CCCCGCTGAT CGTGCTTGAA GCGCACAGCC ATGGTGTGCC CGTCGTTGCG CATGACCGTG GCTGTATCGG GTCCATGATC GACGAGCGCA ATGGCGTGCT GGTGCCGGCC GACGCGGACT TTGCCGAAGC CGCCATCGCT TACCTGCGGA ACATGATGCT CGCGCACTCG CAGGCCGAAT CGCAGGCCGA ATCGAAACGT GCGGCGCTGC TCGCCGACTT CCAGGCTCAG CGCGGACGCG CCGAGGCCGT TCTGGCGCGC GCGGTGGCGG ATATCAGCCA CTGCCCCGAC TGA
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Protein sequence | MTIPNTLGPI ARQPVDDDIP PSPAQSLAQA GAPSTVARPV LFLGPLPPPH HGFSASNQRM VDQIRQHAPV VVLDVAPRAS GRFGGRLGGL QALGNRARQL WRMVRLVTNR KPGNRPHTLY MGLSGGLGQL LDAPFVALAH WSGMDIYFHH HSFAYINRPT WYTRLILRCA PRGRHLTLCD RMRAELARLY RLTPDRVQVL SNLSLIDLPA TTSTEAPARR HSEAINVGFL SNITAAKGIF TFLEVVRLAQ EIGIPVCARI AGPVARHIRA RFDTELARTP CTRYLGPIHG TEKEAFFQDI DVLMFPTTYH NEAAPLIVLE AHSHGVPVVA HDRGCIGSMI DERNGVLVPA DADFAEAAIA YLRNMMLAHS QAESQAESKR AALLADFQAQ RGRAEAVLAR AVADISHCPD
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