| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_5845 |
|---|
| Symbol | |
|---|
| ID | 4042709 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cupriavidus metallidurans CH34 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007974 |
|---|
| Strand | + |
|---|
| Start bp | 36880 |
|---|
| End bp | 38727 |
|---|
| Gene Length | 1848 bp |
|---|
| Protein Length | 615 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 637981264 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_587973 |
|---|
| Protein GI | 94314764 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG2267] Lysophospholipase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 30 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 21 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGACGGG TCGTGTTCGA AGGCTGCGCG GGGTGGTTGC ATGAGGCTGG GGGCGACACG
GGTGTGGTGA TGTGCGCGCC GCAGGGCCAC GAGATGCTGT GGTCCCATCG CGCGTGGCGG
CATCTGGCCG ATGCGCTGGC GATGTCTGGT GTGCCGGTGC TGCGCTTCGA CTACCGTGGC
ACAGGAGATT CCGCCGATCT GGAGCCCGGC GCGGACATGT TCGGCGGCGC GCTGGCGGAT
ATCGCGGCGG CCGTCCTGGC GCTACGCCGC GAGACGCACG TCACCCGGGT GGTGCTGTGC
GGGCTTCGCC TGGGGGCATC GCTCGCCGCG CTTGCCGCCG CGCGCGGGCG GGAAGTCAGC
GGCGTGGTCA TGCTGGCCCC CGTCGTCAAC GGCCGCTTGT ATCTGCGGGA GCTTCGCGCG
TTGCATGCGG GCTGGCGCAA CAGCATGATT CCCGAACTCG AGGTACCGCC CACGCCTGCC
GGCGAGCAGG ACGTGCTCAG CTTCCGCTTG TCCGCCGCGA CCATCGCCGC CATCCAGGCG
ATGCGGCTCG ATGACGTCGT GCCCGCCCGT CGCGTGTTGC TGCTCGATGC ATGGCCGGAT
GCGGCATCGC CAGTTGCGGC GATGGCCCTG AAACTTGGCG AGGCTGGCGT TGACGTCGAC
ATGGCGCCGT TCGCCGAGTA TCCGGAGATG ATGCGTTCGA CCGAGTTCGC GGATGTGCCC
GTGGAGGCCT GGAAGCACGT AGCCGACTGG GTGAAAGCAG GCACGGCCCG CCAGCCTGAA
GTGTCGGCCA GCGCGGAGGC CGCACCTGAC AGTGCCAACA GCGCCAACAG CGCTGGCGAC
GCGCTGGTGG GCGAGGGCAT GGACGGTGTC GTGGAACACC CGGTGTGGCT GGACGAAGCA
CGGATGTTCG GCATCCTCTG CGTGCCCGCA GAGGCCAATG CCAACGCCAG ACAGGCAAAC
ACGGTCGTGA TCTTTCCGAA CACCGGCGGC AATCATCACA TCGGAGACGG CCGCATGTTC
GTGGACGTCT CGCGGCAACT GGCACGCGCA GGCACGGCGG CACTGCGGCT GGACGTATCG
GCCCTGGGCG ACAGCCCTGC CCCGGCGTGC AAGATGAGCG TGTCGGCGAT CTATTCGATG
AAGCCCCGCG CGGACCTTGC TGCCGCCGTG GATTGGGCAC GCGCGCGCGG CTTTGGCGAC
GTCGTGGTTG CCGGCGTTTG CTCCGGCGCA TTCATGGGCC TGTATGCCGC GCTGAGCAAC
CCGGGCGTCA GCGGGCTGCT GCTGGTGAAC CTGGTGAAGT TTCGCTGGGA CGAGGCCGAT
GATGCGGCGG TGGGCGACCA CCTGCGTTCG ATGCGTGTCT ACCTGGCCGC GGCACGGCAA
TGGGAAACCT GGCAACGGCT GTTCCGTGGC GAGATCAACG CGCGCCGCCT CTTGTCGGCA
ACGTTGCGCA GGGTACGGCA GCGTGTGCAC GACCGCGTGT CCGCTGTCGG CGGGCGGATG
CGGCGTAACG ACGTGCAGCA GACCATGCCC GAGTTCGCCG CTGCCGCCGT GCGGGAACTG
GACCGGCGTG GCGTGCCGAC GATGTTCCTG TATGGCGCCA CGGACGTGGG TTTGCATGAA
CTGCGACTGG GCCTGGGCAA GCACCTGGAG GCTATCCAGG GATTGCGCAA TGTCCAGTTC
CGCACCTTGC CGCTGCTCGA TCATTCACTG TTCCTCGACG CGAGCCGACA GGCCTTCGCC
GAGCAACTGA TCGAGCATCT CCGGTGGATG TCGATGGACA GCTCCGAGAC GTCGGATACG
CCCGAGGCAG CCATATCGTT CACGCCAGTG ACCCAGCGCG CGGCGTAG
|
|---|
| Protein sequence | MRRVVFEGCA GWLHEAGGDT GVVMCAPQGH EMLWSHRAWR HLADALAMSG VPVLRFDYRG
TGDSADLEPG ADMFGGALAD IAAAVLALRR ETHVTRVVLC GLRLGASLAA LAAARGREVS
GVVMLAPVVN GRLYLRELRA LHAGWRNSMI PELEVPPTPA GEQDVLSFRL SAATIAAIQA
MRLDDVVPAR RVLLLDAWPD AASPVAAMAL KLGEAGVDVD MAPFAEYPEM MRSTEFADVP
VEAWKHVADW VKAGTARQPE VSASAEAAPD SANSANSAGD ALVGEGMDGV VEHPVWLDEA
RMFGILCVPA EANANARQAN TVVIFPNTGG NHHIGDGRMF VDVSRQLARA GTAALRLDVS
ALGDSPAPAC KMSVSAIYSM KPRADLAAAV DWARARGFGD VVVAGVCSGA FMGLYAALSN
PGVSGLLLVN LVKFRWDEAD DAAVGDHLRS MRVYLAAARQ WETWQRLFRG EINARRLLSA
TLRRVRQRVH DRVSAVGGRM RRNDVQQTMP EFAAAAVREL DRRGVPTMFL YGATDVGLHE
LRLGLGKHLE AIQGLRNVQF RTLPLLDHSL FLDASRQAFA EQLIEHLRWM SMDSSETSDT
PEAAISFTPV TQRAA
|
|---|
| |