Gene Rmet_5841 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRmet_5841 
Symbol 
ID4042705 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCupriavidus metallidurans CH34 
KingdomBacteria 
Replicon accessionNC_007974 
Strand
Start bp30636 
End bp31364 
Gene Length729 bp 
Protein Length242 aa 
Translation table11 
GC content64% 
IMG OID637981260 
ProductCrp/Fnr family transcriptional regulator 
Protein accessionYP_587969 
Protein GI94314760 
COG category[T] Signal transduction mechanisms 
COG ID[COG0664] cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones49 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCACGC ATCGGTCGGA CTTGCATGTC AATCACTTGC TCAACGCATT GCCGCGCCAT 
GAATGGGAGG CGTTGTCGAG GCACTTCGAG CTGGTTCGCC TGCGTGCCGG CGAACTGCTG
ACCGACTCGG GTCAGCGAAT CGTCCACGTC TATTTTCCGA CCACGTCGGT GGTCTCGCTG
CTGTCACTGC TGGAAGACGG CGCTACCGTC GAATTCGCGG CCGTCGGCAA CGAGGGGCTG
GTGGGCATTC CAGTGGTGAC CGGTGGCGAC ACGATGCCGA GTCGCGTGGA AGTGCGCAGC
CCGGGTTTCG CGTACCGGAT TCCGGCCCGT GTGCTGCGTT CGGAACTGGG CCAGCTGCCC
GCGCTGCAGC GCGTGACGCT GCTCTATGTG CAGGCTGTGT TGACGCAGAT TGCGCAGACC
GCAGCGTGCA ACCGCCACCA CTCGCTCAAC AAGCAGCTTT GCCGCTGGTT GCTGCTGGCC
ATCGACCGCA TGAGTACCAA TGAACTGGTG ATCACGCAGC AGGTCATCGC CAACATGCTC
GGCGTGCGCC GCGAAGGTGT GACCGAAGCC GCCGGCAAGC TCGAGGACCT TGGACTGATC
CACCATAGCC GCGGCCATAT CACCGTGCTG GACCGCTGCG GCCTGGAGAA GCACTCATGC
GAGTGCTACA AGCTGGTCAA GCGCGAGTAC GACCGCCTGC TGCCCGCGCT GGCCGACGTG
CACGCCTGA
 
Protein sequence
MITHRSDLHV NHLLNALPRH EWEALSRHFE LVRLRAGELL TDSGQRIVHV YFPTTSVVSL 
LSLLEDGATV EFAAVGNEGL VGIPVVTGGD TMPSRVEVRS PGFAYRIPAR VLRSELGQLP
ALQRVTLLYV QAVLTQIAQT AACNRHHSLN KQLCRWLLLA IDRMSTNELV ITQQVIANML
GVRREGVTEA AGKLEDLGLI HHSRGHITVL DRCGLEKHSC ECYKLVKREY DRLLPALADV
HA