Gene Rmet_5820 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRmet_5820 
SymbolparB 
ID4042684 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCupriavidus metallidurans CH34 
KingdomBacteria 
Replicon accessionNC_007974 
Strand
Start bp3430 
End bp4446 
Gene Length1017 bp 
Protein Length338 aa 
Translation table11 
GC content62% 
IMG OID637981239 
Productplasmid partition protein 
Protein accessionYP_587948 
Protein GI94314739 
COG category[K] Transcription 
COG ID[COG1475] Predicted transcriptional regulators 
TIGRFAM ID[TIGR00180] ParB-like partition proteins 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAACGA AATTGAAGAG TCTCAAGGCG GGGATGCTCG CCGGCATGGC CGCAGAAAAG 
ACCCGCAGCG ACGCGATCGA CCGGTTCGCG CGTGCGGAGG CGGCCATTTC CCAGCATCCA
AATGGGCTGT TGCAGTCGGC GCGCGCAATC CCGCCGCAAT CGACTTTCAG CGCTGAAAGT
GATGAGAGCG TGATCGAAGG GCGGACGCTG ATAAAGATTC CCATCGCCCA GCTGCATGAC
AACCCCTTCA ATGCCCGCCG CATCTACGAT CCGGCGGTTG TGCAGGAGCG CGCGGCGTCG
ATTGCCACGC ATGGTCAAAA GACGCCGGGT CTGGCTGCGT CCGACCCGAC CCGTCCCGGC
CACTACATCC TGATCGACGG TCACTACCGC AAGCGCGCAC TGGCGTCAGC GGGCAAGCTC
GAGATGGAAT GCTTCATCGA GACCGACCTG AGCGATCTCG ATTTCTATCG CCTTTCCTTC
CTGCTCAACG AGCAGCGGTC GGACCAGTCC GCACTCGACA ACGCGATCGC CTGGCGCCAG
TTGCTCGATG AGGGCAAGGT TCAGAAGGAG GACGAAATCT GCGAACTGAC CGGAATGTCG
GCCGGCACCG TCAACAAGAC ACTGGCCTTG CTCAAGCTGC CCGAGTCCGT TCTGGCGGTT
ATGCGCGAAC GTCCGAGCGC GATCGGGATT GCTACCGGCT ACGAGCTGAC GCTGTACTGC
AAGGTTGCCG GCGAAGACCG CACGCGCGAT CTGGCCACGC GCATCATGAA CGACGGCATG
TCCAGCCGCG AGGTCGAAGC GATTCGCAAG CAGGCCCAGG AAGGGAAGTC CCGCAAGGTC
AAGGAGATCA GCCGCCAGTA CAAGATTCGG ACAGAATCGG GCCAGCTACT CGGGACGATC
AAAGAGTGGG ACTCCGGCCG TGTCATGCTT GATGTTCAAC TCACCGACCG CAGTGCCCGG
GAAGACCTGC TGGACGTCCT CAAGGCCCGC TTCGGGTTGG ACAAGACGCT GATCTGA
 
Protein sequence
MATKLKSLKA GMLAGMAAEK TRSDAIDRFA RAEAAISQHP NGLLQSARAI PPQSTFSAES 
DESVIEGRTL IKIPIAQLHD NPFNARRIYD PAVVQERAAS IATHGQKTPG LAASDPTRPG
HYILIDGHYR KRALASAGKL EMECFIETDL SDLDFYRLSF LLNEQRSDQS ALDNAIAWRQ
LLDEGKVQKE DEICELTGMS AGTVNKTLAL LKLPESVLAV MRERPSAIGI ATGYELTLYC
KVAGEDRTRD LATRIMNDGM SSREVEAIRK QAQEGKSRKV KEISRQYKIR TESGQLLGTI
KEWDSGRVML DVQLTDRSAR EDLLDVLKAR FGLDKTLI