| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_5809 |
|---|
| Symbol | |
|---|
| ID | 4042673 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cupriavidus metallidurans CH34 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007974 |
|---|
| Strand | - |
|---|
| Start bp | 2572333 |
|---|
| End bp | 2573298 |
|---|
| Gene Length | 966 bp |
|---|
| Protein Length | 321 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 637981228 |
|---|
| Product | ribonuclease BN, putative |
|---|
| Protein accession | YP_587937 |
|---|
| Protein GI | 94314728 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG1295] Predicted membrane protein |
|---|
| TIGRFAM ID | [TIGR00765] YihY family protein (not ribonuclease BN) |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 54 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 19 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCCCCTG AACACGCCCC AAACAACCCG GAGCAGGCTT CCTCGCAACG GGCGCCCAGG
CGCTGGCTTC CAGACCGGCA CACCGGTGGG CGCACCGTGC GCGTGGTGTC GGCCTCAATC
AATTCGTGGC TGGACCATCG CGCCGCCAGC AAGGGCGCGG CGTTGTCCTT CTACATGCTG
TTCTCGCTGG CGCCTATCCT GGTGCTGGTC ATTTCCATCG CCGGACTGTT CTTCGGCGCC
GAGGCGGCGC GCGGTGAGAT CTTCGCGCAG ATTCAGGATC TGGTCGGTGC CAAGGGCGCC
GCCGCGATCG AGGGCATTCT GGCCGCCACG CATCGCGCTG GCGGCAGCGG TGTGGCGGCA
GTCATTGCCA CCGGCATCCT GTTCGTCGGC GCCACCAGCG CGTTCGCAGA GCTCAAGAGC
AGCCTGGACG ACATCTGGCA TGCGCCGCCG CCGGCCGGCG CTGGCTGGCA GAAGCTGCTG
CGGGCCCGGC TGCTGTCCTT CAGCATCGTT CTGGTACTGG CTTTCATGCT GCTGGTGTCG
CTAATCGTGA ACGCCGCGCT GGCCGTGATC GACCGTTTCT GGGGGCAGCT CTGGACGGCC
ACATGGTTCG CGCCGGTGGC TGAGGGCATC TCGACGCTGT TTTCGTTCGC CGTCGTTACC
GCGCTGTTCG CAGTGATCTT CAAGATGCTG CCGAATGCGC GCATCGCGTG GCGCGACGTG
ATGATGGGCT CCGTCATCAC GGCCTTGTTG TTTGCCGTGG GCAAGCGCCT GATCGGCCTG
TACCTGGGCA ACAGTGCGGT GGCATCGTCG TACGGGGCGG CCGGATCGGT CGTGGCGCTG
ATGCTCTGGA TCTATTATTC GGCACAAATC TTCTTCTTCG GTGCCGAACT GACGCGCCAA
TACGCACTGC AATTCGGTAG TCTGCGCGGT CATGATCCCG CGCAGGAGCG CGAAACGGTA
AAATAG
|
|---|
| Protein sequence | MPPEHAPNNP EQASSQRAPR RWLPDRHTGG RTVRVVSASI NSWLDHRAAS KGAALSFYML
FSLAPILVLV ISIAGLFFGA EAARGEIFAQ IQDLVGAKGA AAIEGILAAT HRAGGSGVAA
VIATGILFVG ATSAFAELKS SLDDIWHAPP PAGAGWQKLL RARLLSFSIV LVLAFMLLVS
LIVNAALAVI DRFWGQLWTA TWFAPVAEGI STLFSFAVVT ALFAVIFKML PNARIAWRDV
MMGSVITALL FAVGKRLIGL YLGNSAVASS YGAAGSVVAL MLWIYYSAQI FFFGAELTRQ
YALQFGSLRG HDPAQERETV K
|
|---|
| |