| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_5795 |
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| Symbol | |
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| ID | 4042659 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cupriavidus metallidurans CH34 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007974 |
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| Strand | - |
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| Start bp | 2551963 |
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| End bp | 2553867 |
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| Gene Length | 1905 bp |
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| Protein Length | 634 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 637981214 |
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| Product | OPT superfamily oligopeptide transporter |
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| Protein accession | YP_587923 |
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| Protein GI | 94314714 |
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| COG category | [S] Function unknown |
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| COG ID | [COG1297] Predicted membrane protein |
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| TIGRFAM ID | [TIGR00728] oligopeptide transporters, OPT superfamily |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.105717 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTCGATG GCTGCCGGCC CTCGCCCACG CTCGCAGAAA CGGGTACGCT TCGGGCATTT
GGCGTGCGCA GAAATGGGTA CGCTTTGGCG GTCGAGGATG GTGGAGATGT CCGGCATCCT
CCCGCAGCCG CTCGCAATCA CCCGATGCCC ACTACCCTCA CCCGAGAATC CCCAACCTGG
CTGCCCGCCC CCGATAGCTG GCAATACCAC CTGCTGCTCG GCGCGGCCGG GATGCTGATC
CTGGGGCCGC TCGGCGGCAT CGCCGCGGCC TACATGAACT TTTCGCTCGG GTTCTTCGTG
GGGGGACAGG TACTGGCCGG CATTCTCGGG TCGGCCGTGA CGGCGGGCTA CGGCGCATCC
GGGCGTCACG GCGCGAACTA CATCCAGACC GCCGCCGCGT CCGTGGCTGG CATGAGCGGC
ATGGCCGTCG TGATCCAGGC GATGGGCTGG ATGGGCATGA CGCCGCCGCC GATGTGGCAG
TTGATCAGCT ATATGCTCTG CATCGGCATG TATGGGGTGG GCGTGGGAAT GCTCTATACC
CCGCTGCTGG TGGACCGGAT GCAGCTCACG TTCCCGTCCG GGCTCGCGGT GGCCAATATC
CTGCGCGCGC TGACCGATCC CGTGCTGCTG CGGCGCTCGG TTGCCCGCCT GGCGGGCGGC
ACCGGGCTTG GCGTGCTGGC GAGCATCGGT GCCACACGCG TGGTATGGCT TGGCGCGATC
GACCTGTCGG CTTCCACGTT TGGCGCGGGC ATGATCGTCG GTGCCCGCAT TGGCATCGCG
GCGCTGGTCG GCGGGCTCGC GAGCTGGGCG TTGACGCCGT ACTTTGTTTC CATCGGCTGG
CTGGCACCGG GCGACCCCTA TCGCAAGATC ACGTTCCTGA TCGCGCTGGG CATGATCATG
GGCGCGGCGG CCGTCGATGT GTCGCTGCTC CTGATGCGCG CGGCGCAACG CACGCGTGCC
ATTGCCTCGG GCGGCAGGGC GCCGCAGCGC TGGATCGTCG CATGGGTAGC GGTCTGGGGC
GCGGCGGTCG TGGCCACCGG CGTGGCCTGG TTCGGCCAAC CGGTCGGCTA TCAACTGATG
GCCGTGGCAC TGGTGCTGAT ATTCGCGCTA GTCAACGGCA TCTCGGTCGG CATGGTCGAC
CAGAATCCGA TTTCGTCCGC GTTCGTGCTG ACGGTGATCC TGATGGCGGC GGTGGGTTTG
CGTCAGCCGC ATGTCGGCTT GATTGCCGCA ACCGTGCTGC TGGTCTCCAC CGCGGAGGCG
TGTGACATGC AGCAAGACCG TTCCACCGGC TGGCGCCTTG GCACCAATCG CATGATCCAG
TTCGGCTATC AGGTCGCCGG TATCGTCGTG GGCGCGATCC TGGCGGTGCT GCTCGCGCGT
CTGTTCATGG AAGCTTATCC GGTTCTGCGA CTGGATCAGA CCACGCTGCC CGCCGATGCG
CAGCCCGCGC GCTGGACGTC GGCCATGACC TACAAGATTG TCGGTGCGCT GCGCAGCATG
ACTGAGGACA AGCCGTATCT GCGTCTGGCG GTATGGATCG GCCTGGGCAT TGGGCTCGTC
ACCGAAGTCC TGCGCAAGCT GATAAGGGCG TCGGCGCGTT ATCGCCGGTT CGCGGAGCAG
AGCCGTGTTG GCAAGGGCTG CGATTTCCTT CTGGATGCCG TGCTGCTGCC GTCGCCGTAT
GCGTCGTCCT TCGGCGGCTT CGTCAACTTG CCCGCCGCCG CGTGGATGGC GGCCGGTGGC
GTGGTCGCCA GCCTGGTCGA CAGCCGGGTG CAATCGTCAT CAAAGGATGC GGCGTTGCCC
GATGACATGA GCACGACATC GCTGGTCGGT GGCGGACTGA TCGCCGGCGA TGCGCTGGCC
GCGCTGGGGT TCGGCATCGC GGGCCTGCTG GCGGTCGTGC ACTGA
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| Protein sequence | MLDGCRPSPT LAETGTLRAF GVRRNGYALA VEDGGDVRHP PAAARNHPMP TTLTRESPTW
LPAPDSWQYH LLLGAAGMLI LGPLGGIAAA YMNFSLGFFV GGQVLAGILG SAVTAGYGAS
GRHGANYIQT AAASVAGMSG MAVVIQAMGW MGMTPPPMWQ LISYMLCIGM YGVGVGMLYT
PLLVDRMQLT FPSGLAVANI LRALTDPVLL RRSVARLAGG TGLGVLASIG ATRVVWLGAI
DLSASTFGAG MIVGARIGIA ALVGGLASWA LTPYFVSIGW LAPGDPYRKI TFLIALGMIM
GAAAVDVSLL LMRAAQRTRA IASGGRAPQR WIVAWVAVWG AAVVATGVAW FGQPVGYQLM
AVALVLIFAL VNGISVGMVD QNPISSAFVL TVILMAAVGL RQPHVGLIAA TVLLVSTAEA
CDMQQDRSTG WRLGTNRMIQ FGYQVAGIVV GAILAVLLAR LFMEAYPVLR LDQTTLPADA
QPARWTSAMT YKIVGALRSM TEDKPYLRLA VWIGLGIGLV TEVLRKLIRA SARYRRFAEQ
SRVGKGCDFL LDAVLLPSPY ASSFGGFVNL PAAAWMAAGG VVASLVDSRV QSSSKDAALP
DDMSTTSLVG GGLIAGDALA ALGFGIAGLL AVVH
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