| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_5761 |
|---|
| Symbol | |
|---|
| ID | 4042625 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cupriavidus metallidurans CH34 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007974 |
|---|
| Strand | + |
|---|
| Start bp | 2522354 |
|---|
| End bp | 2523301 |
|---|
| Gene Length | 948 bp |
|---|
| Protein Length | 315 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 637981180 |
|---|
| Product | LysR family transcriptional regulator |
|---|
| Protein accession | YP_587889 |
|---|
| Protein GI | 94314680 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG0583] Transcriptional regulator |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 49 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 23 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAATACGC GTCAACTACG CCACTTTCTG GCCCTTCTCG ATACTGGCTC ATTGGCCGCG
GCGGCCGAAT CGGTTCATCT GAGCCAGCCA GCGCTATCTC GCAGCATCCG CGCGCTTGAA
GACATGCTTG GCGTGCCGCT GTTCGACAGG AATGACCGGC GGCTGCGCCC GACCACCTAT
GCCATCGCCT ATGCGCCCCG CGCGCGCAGC ATGCTTTCCG ACGAAAAAGA AGGCCTGCGG
ACACTCGGCC TGATGCAGTC CGGTGATCTC GGCACGTTCT CGGTAGGCAT GGGCTCTTCG
CTTGCCACGC CAATCCTGCG CCCAATGCTG GCCGAACTGC TGCGCACATC GCCTGGACTG
CGGCTGCGCA GCCTGATCGA CACGTCCGAG CGACTCCTCG ATGCCCTGCA TGCCGAACGC
ATCGACTTCT TCGTCGGCGA CACCCGCGTG GCAAAGCTGC ACGATGGGCT GGCGATCGAA
TCCATCTTTC CTTGCACATT TGGCTGGTAT GCGCGGCGCG ATCACCCGCT CGCAAACAAC
GAAAATGTCA GCGCCGCGCA GATCCGCGAG TACCCTCTGA TCGCGCCCGG CTACTTCGAA
CCATCGCTGG GACAGCGGCT TGCGCAACTC TACGAACTGC CCGCGCCCGT GCAGGACCAG
TTCGCGCTGA TCTCGGACGA CATCGGCACC GTACTGGAGA TCGTGGCATC CACCGATGCA
GTTGTCCCGC TGACGGACCT TGCCGCGATC TCCGCGCTCA AATCACAGCT CATTGTCGAA
CTTGCCGTAC GGCCCGCACT GGAACTGGAC TTGACGCTCG GTATCGTCCG GCATGGCAAC
CGCACCATGG CGCCCGCGAC CATGATGGCC TTCGAGATCA TCCGCCAGCG CTTCGCCATG
GCGGCAAGCG AGATTGCCAC CATCAAAGGA CTTGCGGCGG ATCGGTGA
|
|---|
| Protein sequence | MNTRQLRHFL ALLDTGSLAA AAESVHLSQP ALSRSIRALE DMLGVPLFDR NDRRLRPTTY
AIAYAPRARS MLSDEKEGLR TLGLMQSGDL GTFSVGMGSS LATPILRPML AELLRTSPGL
RLRSLIDTSE RLLDALHAER IDFFVGDTRV AKLHDGLAIE SIFPCTFGWY ARRDHPLANN
ENVSAAQIRE YPLIAPGYFE PSLGQRLAQL YELPAPVQDQ FALISDDIGT VLEIVASTDA
VVPLTDLAAI SALKSQLIVE LAVRPALELD LTLGIVRHGN RTMAPATMMA FEIIRQRFAM
AASEIATIKG LAADR
|
|---|
| |