Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rmet_5737 |
Symbol | kpsS |
ID | 4042601 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cupriavidus metallidurans CH34 |
Kingdom | Bacteria |
Replicon accession | NC_007974 |
Strand | + |
Start bp | 2497958 |
End bp | 2499343 |
Gene Length | 1386 bp |
Protein Length | 461 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 637981156 |
Product | capsule polysaccharide modification protein |
Protein accession | YP_587865 |
Protein GI | 94314656 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG3562] Capsule polysaccharide export protein |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 41 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAAAGGCC ATACGTACGC GGCTGACGGT CTTGTCGGTC GGCTTGGCGT CTATGCCCGA GTCCTGCTTT TGCAGGGGCC TGTAGGGCCG TTCTTTGCTC AATTGCGAGA TGATCTGGCC CAGCAGGGAA CCGAGGTCTG GAAGGTTAAC CTCAACGGTG GGGATGACCT CTACTACTAC GGTGAACGCG TGCTCCACTT TGCGCAGCCG ATGGCAGCCT GGAGTGACTG GTTGCGGAAA CTGGTGATCC GGGCGCGCGT GGAGGCCATC GTCGTTTTCG GAAGCACACG GCGTCATCAT AGGATTGCTG CCGGGCTCGC TCAGGAACTC GGGCTCGACT TCTGGGTATT CGAAGAGGGC TACCTTCGCC CCGACTTCAT CACTCTGGAA CGTGGAGGAG TAAATGCCGA TTCCCCGCTG GCCCGCATCC CTCTTGACAC AATACCGCTG CTTCCAGCGC CAGAAGGGCT GCGGCAGTAT CCCGGTGCCT ATTGGAAGAT GGCGCGACAT GCCTTGCGCT ACTTCGCGGC GGGATGGGCT GCGGCGGGGC GCTACCCAGC CTACCGGCAC CATAAGCCAT TCCGACTGCG AGAACTGGCT TGCTGGATCC GGGCGGCTTA CCGCAAGCCG TGGTATCGAC TCCGCGAAAG GCGCTTGGTG GCGCGGCTGC TCATGCCTGG GCATCCGCGG TTCTATCTGC TGGCTCTGCA GGTCTATAAC GATAGCCAGA TCCGCAGCCG CAGTCCGTGG CGTCGAATGG AGGACGTTAT CGAATGGTCC ATCTTCTCGT TCTCGAAGTT CGCTCCCCCG GACTCGTTGC TGGTCATTAA GCATCATCCC ATGGATAGAG GCCATCGCGA CTATGCCGCA GCCATTGCTA CGATCAGCGA CCGGTTCGCA GTGGCTGACA GGATCGTGTA TGTCCATGAT CCGCATTTAC CGTCTCTGTT GCGACGCAGC AGTGGGGTGG TCACAGTTAA TTCCACCATG GGAGTACAAG CTCTGCACCA CGGTGTCCCT GTCATGACAC TCGGCCGTGC CTTCTACGGG CACACGGGCA TGACCTGGCA AGGAACGCTC GACGAGTTCT GGACGTTGGC CCAACCGACG AACCGGCTGG ACTGGATCCG CTGGAAGCAC TATGTCATTC ACGAGTCCCA AGTCAACGCG TCCTTCTACA CAGGAGGCAA GGCCGTGCCC AGCCAAGGGA TGAGCGGCAT TCGGTGCGCC ACGAGGGCTT TCGTAGAGAT GGCAGGTCGC CTGCTGCGAG CCTCGATCCA CGGAATACAA CGCTTCGGGT CGATCGCGAA TAGGCCGGTA AAGGGCGCTG AGCCGTTGCC GCAAAGTCCT TTACCGCGTA AATCATTCTC GGATTACGAC GCGTAG
|
Protein sequence | MKGHTYAADG LVGRLGVYAR VLLLQGPVGP FFAQLRDDLA QQGTEVWKVN LNGGDDLYYY GERVLHFAQP MAAWSDWLRK LVIRARVEAI VVFGSTRRHH RIAAGLAQEL GLDFWVFEEG YLRPDFITLE RGGVNADSPL ARIPLDTIPL LPAPEGLRQY PGAYWKMARH ALRYFAAGWA AAGRYPAYRH HKPFRLRELA CWIRAAYRKP WYRLRERRLV ARLLMPGHPR FYLLALQVYN DSQIRSRSPW RRMEDVIEWS IFSFSKFAPP DSLLVIKHHP MDRGHRDYAA AIATISDRFA VADRIVYVHD PHLPSLLRRS SGVVTVNSTM GVQALHHGVP VMTLGRAFYG HTGMTWQGTL DEFWTLAQPT NRLDWIRWKH YVIHESQVNA SFYTGGKAVP SQGMSGIRCA TRAFVEMAGR LLRASIHGIQ RFGSIANRPV KGAEPLPQSP LPRKSFSDYD A
|
| |