Gene Rmet_5728 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRmet_5728 
Symbol 
ID4042592 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCupriavidus metallidurans CH34 
KingdomBacteria 
Replicon accessionNC_007974 
Strand
Start bp2487303 
End bp2488301 
Gene Length999 bp 
Protein Length332 aa 
Translation table11 
GC content58% 
IMG OID637981147 
Productputative glycosyltransferase 
Protein accessionYP_587856 
Protein GI94314647 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0438] Glycosyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTTCTTG TAAACCACGT AATGTCGAAC GATGTCGCGA GCGGAATCTT CTCTGACATC 
ATCTCGTACT ACCGTAGCTA CGCGCCGCCC GGCATCGAGC ACGTGGCATC AGCCAGTGCC
GCGCTCGGAG GAATGATCCG GCACTATCAC CGGCCAAATC TCGAATCCCG CCTCTCAGGA
CCGTGTGTGG TCACAGTCCA CCACGATCTG CGTGATGACG ATCCTTCGCT CACAGTCCAG
CACTTTACTG ACCGCTACCG AGAGGCTAAC CGCGTGATTT GCCTCAATTC GCTACAGCGG
GACTACCTGG CGGCTGACGG CATTACCAAT ACCGTCGTCA TTCCCCATGG TTATCACGCA
AGGTATATCC GTGCGCGTGG CGATGCCACT GACACACCCT ACCTTGAGAA TACCGGTAGC
GGTAAGAACG GCCGTGTGGT GATAGGCGTG TTCTCGCGCC GCTACCCGAG AAAGGTGAAG
GGCGAGGGCT ATATCTACGA GCTTGCCCAG CGCCTCGATC CAGCCCGCTT CGAATTCGTA
TTGATTGGGA AAGGCCGCAC CTACGATGCC GCGGTGCTGG AGCGGTTTGG CTTCGACGTG
AACGCGTACG AAGCCTTGCC CTACAAAACA GTCGCCTCTG CCTACCGTAC CGTGGATGCC
CTGCTGATGT CTTCCTGGTT CGAAGGCGGC CCCGCAAATA TTCCCGAGGC CGTTGGCGGC
GCCGTGCCTG TGCTGTGTAA CCCAATTGGC ATGGCGAAAG ATATGGTCGT CGACAGGGAG
AATGGGCTTC ATCTTTCCAT GGACGCTGGG TCCGATGCCG AGCGGATCTC TGCGTGGCTT
CTTGATCCAG CTTCCCGCGC GGACCTGCGT GAAGGTGCCA TGCGCAATGC CGGCAATGCC
ATCACCTGGG CCATCCACGC CTCCCGAGTG GTCGACGTCT ATCGGGAAGT ACTCAACGAG
ACTCTGGGAA GTATCCTGAC ATGGCAAAAC GCGTCCTGA
 
Protein sequence
MLLVNHVMSN DVASGIFSDI ISYYRSYAPP GIEHVASASA ALGGMIRHYH RPNLESRLSG 
PCVVTVHHDL RDDDPSLTVQ HFTDRYREAN RVICLNSLQR DYLAADGITN TVVIPHGYHA
RYIRARGDAT DTPYLENTGS GKNGRVVIGV FSRRYPRKVK GEGYIYELAQ RLDPARFEFV
LIGKGRTYDA AVLERFGFDV NAYEALPYKT VASAYRTVDA LLMSSWFEGG PANIPEAVGG
AVPVLCNPIG MAKDMVVDRE NGLHLSMDAG SDAERISAWL LDPASRADLR EGAMRNAGNA
ITWAIHASRV VDVYREVLNE TLGSILTWQN AS