Gene Rmet_5630 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRmet_5630 
SymbolsgaA 
ID4042494 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCupriavidus metallidurans CH34 
KingdomBacteria 
Replicon accessionNC_007974 
Strand
Start bp2386116 
End bp2387321 
Gene Length1206 bp 
Protein Length401 aa 
Translation table11 
GC content65% 
IMG OID637981049 
ProductSerine-glyoxylate aminotransferase (SGAT) 
Protein accessionYP_587758 
Protein GI94314549 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0075] Serine-pyruvate aminotransferase/archaeal aspartate aminotransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTCCGAT TGAACTCACA TCCCAGTGGC CGGCATTTCC TGCAGATCCC CGGACCCACC 
AACGTGCCCG ACCGCGTGCT GCGCGCGATG GATTACCCGA CGATTGATCA CCGGGGCCCC
GAATTCCAGC AACTGGGCAA GAAGGTGCTG GCCGATATCC GCAAGATCTT CCAAACGACC
CAGCCCGTGG TGATCTATCC GGCGTCGGGG ACGGGGGCGT GGGAGGCCGC GCTGGTCAAT
ACGCTGTCCC CCGGCGACAA GGTGCTGATG TATGAGACCG GCCATTTCGC GTCGCTCTGG
AAGAAGATGG CCGACAAGCT CGGCGTTCAC GCCGAGTTCA TCGTGGGCGA CTGGCGTCAT
GGCGTGGATG CCGCTGCAAT CGGCGCGCGC CTGGCCGAGG ACCGCAACCA CGAGATCAAG
GCCGTCTGCG TGGTCCACAA TGAAACCTCG ACCGGCGTGA CGTCCGACAT CGCCGCGGTG
CGCCGCGCGA TCGACGCGGC TGGCCACCCC GCGCTACTGC TGGTCGATAC GATTTCCTCG
CTCGGTTCGG TTGACTATCG CCATGACGAA TGGGGTGTCG ATGTAACGGT GTCGGGCTCG
CAGAAGGGGT TGATGTTGCC GCCCGGCATC TCGTTCAACG CCGTCAGCGC GAAAGCGATC
GCCGCATCGG CCAAGGCCAG GTTGCCCAGG GCGTTCTGGG GCTGGGATGA AATCATCGAA
GCCAACAAGA ACGGATTCTG GCCCTATACG CCGGCCACGA ACCTGCTCTA TGGCCTGTCG
GAAGCGTGCG ACATGCTGCT CGAAGAGGGC CTGCAGAACG TGTTCGCGCG CCATCGCCGC
CATGCCGAGG CCACGCGCGC CTGCGTCAAC GCATGGGGGC TCGAGATCCT GTGCCAGAAC
CCGTCCGAGT ACAGCCCGGC GCTGACTGCC GTGGTGATGC CGGAAGGCCA TAGCGCCGAC
ACGTTCCGCA AGATCGTGCT CGAGCACTTC AACATGTCGC TCGGGCAGGG CTTGTCGAAG
CTGTCCGGCA AGGTCTTCCG CATCGGGCAT CTGGGCGATT TCAATGACCT GACGCTGATG
GGCACGCTGG CCGGCGTGGA GATGGGCTTC GCACTGGCGG GCGTGCCGCA CCATGCAGGC
GGTGTACTGG CCGCCATGGA CAGCCTGCGC GCCGCAGCAT CGCAGCCGTC GCTGCGCGCG
GCCTGA
 
Protein sequence
MLRLNSHPSG RHFLQIPGPT NVPDRVLRAM DYPTIDHRGP EFQQLGKKVL ADIRKIFQTT 
QPVVIYPASG TGAWEAALVN TLSPGDKVLM YETGHFASLW KKMADKLGVH AEFIVGDWRH
GVDAAAIGAR LAEDRNHEIK AVCVVHNETS TGVTSDIAAV RRAIDAAGHP ALLLVDTISS
LGSVDYRHDE WGVDVTVSGS QKGLMLPPGI SFNAVSAKAI AASAKARLPR AFWGWDEIIE
ANKNGFWPYT PATNLLYGLS EACDMLLEEG LQNVFARHRR HAEATRACVN AWGLEILCQN
PSEYSPALTA VVMPEGHSAD TFRKIVLEHF NMSLGQGLSK LSGKVFRIGH LGDFNDLTLM
GTLAGVEMGF ALAGVPHHAG GVLAAMDSLR AAASQPSLRA A