Gene Rmet_5575 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRmet_5575 
Symbol 
ID4042436 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCupriavidus metallidurans CH34 
KingdomBacteria 
Replicon accessionNC_007974 
Strand
Start bp2329055 
End bp2330074 
Gene Length1020 bp 
Protein Length339 aa 
Translation table11 
GC content67% 
IMG OID637980993 
Producthypothetical protein 
Protein accessionYP_587703 
Protein GI94314494 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value0.658002 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATTTCCA ACGTCACCTC GCTCGTTTCC CTTAGCCTTG GCACCGAAGC CGCCGCGCGG 
CTCTCGCAAC TGGTGGCCAT GCCCACGCTG CCGGCCGGCA AGCTGGGTCA CCCCACGCGC
GCCGAGATCG CACATGCGCT GAACCTGGTG CTGTTCGCCG GCATCCTGGA TCGCGTGCCC
ACCGGCAAGG CCTACACGGA GGATGTAGCG GCCACGGGCG GCAAGGTGCA CTTCGATCAC
GGCGCGCTGC GCACCGTCCG CTGGCAGGAG AACGGCGCGT TGCCCGCAGG CGAGGCAGCC
TTCACGCGTA TCCTGCGCCC GCTTGGCTAC CGCCTCAATG GCACGTATCC GCTCGACCGC
ATCGGCATGA CGGGCCGCTC GTATGCCCAC GCCGACGCGC CGGAGGAAAT CGCGCAGTTC
TTCCTCAGCG AATTCCATCC CGAGCGCTAC AGCGAGGACT TCCAGCAAGC CGTGAGCCGC
GTCGTCGGCA ACTCCGCCGA TCCGCTCACG CCGCGCGCGC AGTCGCTACT GTGGGAGCTG
GAACGTGACG GCGCGTTGCC GCTGGCCGAT GCCGGGGAAC TGATCGACCT GCTGGCCCGC
TGCTTCGAGC GTCAGCACGC CACGCCGCAC CTGAACGACT ACGAACGCCT GCTGGCCGAG
TCGTCGGAAA TGGCGTGGAT TGCCACCGAA GGGAATGCGT TCAACCACGC CACCGACCGC
GTGGAGGACG TCTTCGCGGT ATCGGACGAA CAGAAGCGTG TGGGCCGCCC CATGAAGGAA
AAGGTCGAGG TGTCGCAAAG CGGCCGCGTG AAGCAGACCG CGTTCCGCGC CGATCCGGTT
CGCCGCGCGT TCGTTGGCGC CAGCGGTGAC GAGGTGGTGC GCGAAGTACC GGGTTCGTTC
TACGAATTCA TCACGCGCGA TCGCTATGTG GACGAGGCAC AGGCCATCAC GCGCACGGAC
CTGGGCTTCG ACGCCGGCAA TGCGCAGGGC ATCTTCAAGA TGACCGCGGC GGCCTGCTGA
 
Protein sequence
MISNVTSLVS LSLGTEAAAR LSQLVAMPTL PAGKLGHPTR AEIAHALNLV LFAGILDRVP 
TGKAYTEDVA ATGGKVHFDH GALRTVRWQE NGALPAGEAA FTRILRPLGY RLNGTYPLDR
IGMTGRSYAH ADAPEEIAQF FLSEFHPERY SEDFQQAVSR VVGNSADPLT PRAQSLLWEL
ERDGALPLAD AGELIDLLAR CFERQHATPH LNDYERLLAE SSEMAWIATE GNAFNHATDR
VEDVFAVSDE QKRVGRPMKE KVEVSQSGRV KQTAFRADPV RRAFVGASGD EVVREVPGSF
YEFITRDRYV DEAQAITRTD LGFDAGNAQG IFKMTAAAC