Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rmet_5539 |
Symbol | |
ID | 4042400 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cupriavidus metallidurans CH34 |
Kingdom | Bacteria |
Replicon accession | NC_007974 |
Strand | - |
Start bp | 2285486 |
End bp | 2285911 |
Gene Length | 426 bp |
Protein Length | 141 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 637980957 |
Product | hypothetical protein |
Protein accession | YP_587667 |
Protein GI | 94314458 |
COG category | [R] General function prediction only |
COG ID | [COG1545] Predicted nucleic-acid-binding protein containing a Zn-ribbon |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 51 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 29 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGACCCTCG AAGCATTGAT TGTCGACGGT GAGCGTGCGT ACCCGCCGCG GGAATCCGAA TTCACCAAGG AATTCTGGTC GGAGCTAGCA CAGGGCCGCT GGATTACCAC GCAATGCACA GATTGCGGCA AGGCAACGTT CCCGCCAAAG CTTGTCTGTC CCCATTGCTG GTCAACCCAG GTGGAATGGA AGGCCTTGGG CGCTACGGGA ACGCTTTACT CGTGGACGCG TATTCACGCT GCGCCCGCAG TGTTCGCTGC CGAGGCCCCC TACGCATGCG GCATCGTGGA TCTCGATTGT GGAATTCGGT TGGCATGTCG ACTCGTAGAA GACGACGGCG TGCCTTTGAC GATCGGTCAG CCAGTCGAAA TGGTGGTTCT GCAGTACAAG GACGGTCCTC TGTTCGCAGC GCGGCCCCGC AATTAG
|
Protein sequence | MTLEALIVDG ERAYPPRESE FTKEFWSELA QGRWITTQCT DCGKATFPPK LVCPHCWSTQ VEWKALGATG TLYSWTRIHA APAVFAAEAP YACGIVDLDC GIRLACRLVE DDGVPLTIGQ PVEMVVLQYK DGPLFAARPR N
|
| |