Gene Rmet_5522 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRmet_5522 
Symbol 
ID4042383 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCupriavidus metallidurans CH34 
KingdomBacteria 
Replicon accessionNC_007974 
Strand
Start bp2268503 
End bp2269540 
Gene Length1038 bp 
Protein Length345 aa 
Translation table11 
GC content55% 
IMG OID637980940 
Producthypothetical protein 
Protein accessionYP_587650 
Protein GI94314441 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones40 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTACAAGC CCCCAAACAC AAAGCTTCGA TTGAGTCCGC AGGATGAGTA CACGCACGCC 
CCGGAAGCCG CGCGGAACTA TAACGAAAGC ATGTATTTCA ACGCCTTCGA CACGGCGAAG
GGCGTAGGGC TGTGGTTGCG CATTGGGAAT CGCGTCAACG AAGGCTACGC TGAGATGAGT
TGCTGCGTGT ACCTTCCAGG CGGAAAAGTC GGGTTCATGT TCGCTCGCCC AATGATCACT
CACAACGATG CCATGGATGC TGGAGGGATG CGCTTCGAAG TGATGGAGCC ATTTAAGCGT
TTGCGAGTCA AGTATGAGGG CGAACTTCTC ATCATGGACG AGCCTGCTGC AATGGCGGAT
CCGAGCGCGG CGTTCAAGCG GTATCAGAAG CGTCCGTCCA CCATCTACCT GGAGTTTGAA
GGGGTGTCGC CGATGCACGG TGGCGAGATT GTCAATCTCG ACGACACGCC TATTGACCTT
GATCCCGAGA ACTCCGTGTA TCGGGGGCAC ACCGAGCAGC ACATGGCAGT GAGCGGGACA
GTCACGGTGG ACGGTACGAA ATTCAAGTTT GAGAACGGGA CCGGATACCG CGACAAGTCT
TGGGGCCCTC GGCACTGGCA TAACTTTTCC TGGTACAAGT GGCTACCGGT TGCCTTTGAC
CGGGACTTCG GAATGCTCTT CTCTGTCAAA GATCCGACAG CAGCTGCACT ACCCATCAGC
GGCAACGTTC TGTCAAACGG TGAGTATGAG CCCGTCATTG ATGGACGTAT CTGGACGGAG
TACGACGACG ACTATCACCC CAAGCTGCTC ACTGCGTGGA TAACAACTAC CAAGAAGACC
TACATCGTCG AGGGGAAGGT CCTGTCGACA GTACCGCTTC GGCATAGGAA GGCGGGTGGA
GATGCTTCTT CATACACGCG AATTACCGAG AGTATGACGG AGTACACCTG CGAAGGCAGG
ACTGTGCTAG GCATGACTGA GTATTGCGAC ATCATTCAAG ATGGTGTTCC ACTTTCTGTG
CGGCAAGGAC GAGCATGA
 
Protein sequence
MYKPPNTKLR LSPQDEYTHA PEAARNYNES MYFNAFDTAK GVGLWLRIGN RVNEGYAEMS 
CCVYLPGGKV GFMFARPMIT HNDAMDAGGM RFEVMEPFKR LRVKYEGELL IMDEPAAMAD
PSAAFKRYQK RPSTIYLEFE GVSPMHGGEI VNLDDTPIDL DPENSVYRGH TEQHMAVSGT
VTVDGTKFKF ENGTGYRDKS WGPRHWHNFS WYKWLPVAFD RDFGMLFSVK DPTAAALPIS
GNVLSNGEYE PVIDGRIWTE YDDDYHPKLL TAWITTTKKT YIVEGKVLST VPLRHRKAGG
DASSYTRITE SMTEYTCEGR TVLGMTEYCD IIQDGVPLSV RQGRA