| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_5508 |
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| Symbol | |
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| ID | 4042369 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cupriavidus metallidurans CH34 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007974 |
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| Strand | - |
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| Start bp | 2251988 |
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| End bp | 2254015 |
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| Gene Length | 2028 bp |
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| Protein Length | 675 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 637980926 |
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| Product | long-chain-fatty-acid-CoA ligase |
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| Protein accession | YP_587636 |
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| Protein GI | 94314427 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG0318] Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 39 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGTTCTT CGTCTCTACT CAGAATGACG ACCTTTGCAC CTGCGGATGC AAAGCGCTGC
GCGATACCAA GGTTGATGCC GCTAGAGCCG CCGGCGATGA GGGCAACGCG GCCTTCCAGT
GGACGGGGCG AAAAAATGTC TCCGACTGAT GTCATGGTTC CCACGCTCAG ATTTTTATGT
AGATCGACTA TCGTCAATGG TCGAACCAAA TCCTATGTGG GCGATCAGTG TGCAGTCAAG
AAAAATCTAA TGGTTGAACC TATGATTATT GTGAGCTACG ATGGCCTGAG GAGACATCCG
TCGACGTCGA CGGCTATAAA CCATCAAAGA GAACAGATCG CCATGAATGA GGAACGCAAG
CCTCCCCCCT TTTGGCCAAA GGGGTTGCCA ATCGTCCAAC ACGTACCGCG CCTCACGCTG
CCGCAATGTC TGGAAGTAGC AGCTCTTCGG TTTGCCCAGA AGCCGGCATA CGTGATTTAC
GGGCATGTCG TGACCTACGA GAAGCTGTTG AATGACGTGC GGAGCTTAGC GGGGTGGCTG
CAGCAACGCA CCGGCGTGCG GCAGGGAGAC CGAGTCCTTT TAAGTGCACA GACTTCCACT
CAGTTTGTGA CGGCCTACCA TGCGATTCTC AGGGCGGATG CAGTCCCGGT TCTGGCCAAC
CCGATGTGTC GGAGCGCGGA GCTCGAACAC CTGATGAACG ACAGCGGGGC AAAGGTGGCG
ATTGCGGCGC AGGAATTGTG GCCGCAAATG GAGCCGCTTC TTGCCAAAGG CCTTGAAGAC
GTGATGCTGT TTTCCTATCA GTCAGGCTTA GAGGGCATCG GGGATGCAGA TGTGCCAGAC
TGGTTTAGCG TGCCAATTGC GCTTCCCGAA AACGAGAAAG TTTGTGGTTG GGGAAAAGCG
CTTTCTGCCA ACCTGATCCC CTGGCCTGCT CAAGCCCGTG CAGACGATCT TTGCCTCATC
GCTTACACCT CGGGCACCAC GGCGCATCCG AAGGGCTGCA CGCATACTCA CTATTCGCTG
ATGACAGCTG CTGTAACGGC GGCAAACTGG CGCGGGGACA CGACCGAGAC CGTCTTCCTT
GGTGCAGCCC CGATGTTTCA TATGCTTGGG CTCCAGTCGC TCGTCAACAC TGCGATCCAC
CTTGGCGCGA CCTCTGTGCT TCTTCCACGC TGGGATGCAC GCAAAGCGGC CGAACTCATC
GCCCGGTACA GAGTGAATCG ATGGGGCGCT GCTCCCCCAA TGCTGTTGGA CCTGCTCGGT
CTGCCGAACT TGCCGGATAG TGCGCTCGAA AGTCTCGCCC TCATCAACGG CGGTGGTGCA
GCGCTGCCGG AGGCCGTTAA CAAGCGGTTA TCGGAGGAGC TAAGGATTCA TTACATGGAA
GGTTACGGGA TGACAGAAAC TGCGGCCATG GTTATGGCCA CGCCGCTACA ACGCCCAAAG
CGCCAATGCT TAGGTATCCC GACCTTTGGT GTAAGTGCTG CGCTGGTCGA CCCTGCGACG
TTGGAGTTCT ACCCGGACGG GCCCACGACG GAGAGCGGAG AGTTGTGGAT TTCGGGCGAC
CAAGTAAGCC CTCACGGCTA CTGGAATAAC GAGCCTGCTA ACCGCGAGTC GTACGTGGAG
CGGGGTGGAA AACGATGGCT GCGAACGGGT GATCTTGCCG TGCGTGATGA GGACGGCTAT
TACTTCCTGG TGGACCGCCT CAAGCGAATG ATCAACGTCG GGGGCTACAA GGTCTGGCCT
GCCGAGGTCG AATCACTACT GCATAGTCAC CCAGCTATCC AGGAGGCCTG CGTCATTGCG
GTCACAGACG AGCGCCGCGG CGAGCGAGTC CGGGCGCTCG TGGTCGTGCG CAACGGCGCA
TCGCTCACCG AGGAAGAACT GACTGAATGG TCGCGATCGA ATATGGCGGC CTACAAATGC
CCGCGAGAGA TCATCTTTAC CGACCGATTG CTACGGTCGC CGACAGGGAA GATTGATTGG
CGCAGGATGC AGGAGCGCGC CAACATGCCA GAAGAACGGG CTAGCTGA
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| Protein sequence | MRSSSLLRMT TFAPADAKRC AIPRLMPLEP PAMRATRPSS GRGEKMSPTD VMVPTLRFLC
RSTIVNGRTK SYVGDQCAVK KNLMVEPMII VSYDGLRRHP STSTAINHQR EQIAMNEERK
PPPFWPKGLP IVQHVPRLTL PQCLEVAALR FAQKPAYVIY GHVVTYEKLL NDVRSLAGWL
QQRTGVRQGD RVLLSAQTST QFVTAYHAIL RADAVPVLAN PMCRSAELEH LMNDSGAKVA
IAAQELWPQM EPLLAKGLED VMLFSYQSGL EGIGDADVPD WFSVPIALPE NEKVCGWGKA
LSANLIPWPA QARADDLCLI AYTSGTTAHP KGCTHTHYSL MTAAVTAANW RGDTTETVFL
GAAPMFHMLG LQSLVNTAIH LGATSVLLPR WDARKAAELI ARYRVNRWGA APPMLLDLLG
LPNLPDSALE SLALINGGGA ALPEAVNKRL SEELRIHYME GYGMTETAAM VMATPLQRPK
RQCLGIPTFG VSAALVDPAT LEFYPDGPTT ESGELWISGD QVSPHGYWNN EPANRESYVE
RGGKRWLRTG DLAVRDEDGY YFLVDRLKRM INVGGYKVWP AEVESLLHSH PAIQEACVIA
VTDERRGERV RALVVVRNGA SLTEEELTEW SRSNMAAYKC PREIIFTDRL LRSPTGKIDW
RRMQERANMP EERAS
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