| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_5487 |
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| Symbol | |
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| ID | 4042348 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cupriavidus metallidurans CH34 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007974 |
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| Strand | - |
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| Start bp | 2228957 |
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| End bp | 2230732 |
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| Gene Length | 1776 bp |
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| Protein Length | 591 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 637980905 |
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| Product | putative ATP-dependent DNA helicase Rep |
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| Protein accession | YP_587615 |
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| Protein GI | 94314406 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0210] Superfamily I DNA and RNA helicases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 53 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGTCTAATC GCGCCGCCTA TCTTCAAGCT GCCGAGGAGC TTCGCGACAA TCCTGGGCAG
TGGGCAGCTT ACGAGTCGCG AGGACACTGT GTAGTCTTGG CTGGTCCTGG TAGCGGCAAG
ACGAAGACTC TCACTACCAA GATGGCACGG CTTCTCGCAG AGGACGTAGC CGAGCCGCGG
GGTGTCGCAT GCATTACGTA CAACAACGAG TGTGCTCGTG AGCTAGAGGC ACGACTTTCT
TCGCTAGGCG TAGAGCCAGG CGGGCGTGTT TTCGTAGGAA CTGTGCACTC ATTCTCGCTT
ACGCAGGTGA TCTTGCCCTA CGCGAAGGTG GCGGGTTTGG GATTACCAGA TGACTTCCGT
GTCGCCACCA ATGCGGAAGC GCTTGCGGCT CTGGACGATG CGGCCCAAGT TGCCATGGGT
GCGGTTCCCA ATCTGCAAAC CATACGCTCG CAAATGGGGA GCTATCGTCG CTCAATCCTT
AATCGGGACA GCGACCTATG GCGGGATACG AATCCTCGTT TGGCAAGGTT GGCTGAGGCC
TATGAGGCCG AGCTCCGCGT TCGTGGGCTC ATTGACTTCG ATGACATGCC TCTTCTCGCA
GTTCGTGCGC TGAGAGAGAA CCCTTGGCTT CAGACAGCAT TGCTTGCGAA ATACCCTGTC
CTGGTCGTTG ACGAGTATCA GGACCTCGGT GCGGCTCTGC ACCGCATGGT TATGGGCCTC
TGCTTTAGTG CTGGTATGCG GCTTTTCGCA GTGGGAGATG TCGACCAGTC GATTTACGGC
TTCATTGGAG CTCAGCCGCA AATGTTGCAG CGTCTGGCCG AGAGGGAGGA TGTGGAGATC
ATTCGCCTTC AGCTCAATTA TCGGAGCGGA CATCGAATCG TGGCCGCGTC TGGCGCTGTT
CTTGGGGTGG ATCGCGGGTA CGCGGCGGTG GACGGGGCGC CGCAGGGTGA AATTTTCTTC
CATTCCCTCG GGGGTAGCTA CGAGGTGCAG GCTCGTCGTC TCATGACCGA CCTCCTTCCC
GCCGCTATGG CGCGTGAGCC AGGTGTTCGC TACGACGAAA TTGCCGTCTT GTATCCCGCC
GCCTGGATTG GCAATGCTGT CGCAGAGGCG GCGCGCCACG CCGGAGTTCC GTTTATTCGG
ACGGATGGTA ACGCTCTATA TCCCAGGTCG AGCCGGTTGA TGCAATGGTT GGAACTGAGC
GCTCAATGGT GTTGCGGAGG GTGGCGGACT GGTAGCCCAC GGTTTTCCCA GTTGGTATCG
GAGGGGCGAA GGCTGTTCGG GGACGCCATC CGAGCAGAAT TGGACGCAGC GGCATTTCAT
CGAGCGCTAG TGGCTTGTCT ATGGGAGATG CGAAGACCCG ACATGGTGCT CTATGACTGG
CTACAGCGAT TCAAGCGCAC CGTGTTGGAC CAACATGCCC AACTATCGCC GAACCTGAGG
GATGAGCTCA ACATCCTGGG TTCGTTTCTG GAGAGAGTCT CGCCGGATGC CGACTACGCG
GAGATGACTG TTGCGGAGTT TGCCGGCGAA CATACATTCG ACAGGCTGAT GCTGTCCACG
CTTCACAGCG CAAAGGGCCG AGAGTTTCGC TTCGTATTTC TGTTTGGGAT TGATCACGGG
CGATTGCCAC GGAATGGCGC CAGACCTGAT GAGATCAATG AAAGTCGTCG GCTATTCTAT
GTGGGCATAA GCCGAGCAAG AACAGAGGTC CACATTGCCT ACACACACGG CAACTCGTCA
ATCTTCGTGG ATGAGCTTCA AGCGCGGTTG AACTGA
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| Protein sequence | MSNRAAYLQA AEELRDNPGQ WAAYESRGHC VVLAGPGSGK TKTLTTKMAR LLAEDVAEPR
GVACITYNNE CARELEARLS SLGVEPGGRV FVGTVHSFSL TQVILPYAKV AGLGLPDDFR
VATNAEALAA LDDAAQVAMG AVPNLQTIRS QMGSYRRSIL NRDSDLWRDT NPRLARLAEA
YEAELRVRGL IDFDDMPLLA VRALRENPWL QTALLAKYPV LVVDEYQDLG AALHRMVMGL
CFSAGMRLFA VGDVDQSIYG FIGAQPQMLQ RLAEREDVEI IRLQLNYRSG HRIVAASGAV
LGVDRGYAAV DGAPQGEIFF HSLGGSYEVQ ARRLMTDLLP AAMAREPGVR YDEIAVLYPA
AWIGNAVAEA ARHAGVPFIR TDGNALYPRS SRLMQWLELS AQWCCGGWRT GSPRFSQLVS
EGRRLFGDAI RAELDAAAFH RALVACLWEM RRPDMVLYDW LQRFKRTVLD QHAQLSPNLR
DELNILGSFL ERVSPDADYA EMTVAEFAGE HTFDRLMLST LHSAKGREFR FVFLFGIDHG
RLPRNGARPD EINESRRLFY VGISRARTEV HIAYTHGNSS IFVDELQARL N
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