Gene Rmet_5460 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRmet_5460 
Symbol 
ID4042321 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCupriavidus metallidurans CH34 
KingdomBacteria 
Replicon accessionNC_007974 
Strand
Start bp2208084 
End bp2208821 
Gene Length738 bp 
Protein Length245 aa 
Translation table11 
GC content60% 
IMG OID637980878 
Producthypothetical protein 
Protein accessionYP_587588 
Protein GI94314379 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones40 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCGCCAAC TCGGATCCTC TTGCAGTTTC ATGGGGCAAC AGTCCAGCCC CTCTCAGGAT 
GCAGTGCGTC GAGAGAAACT TGGTTCGTCA GCCGACAGGT TGCCACAGCC ATTCTATCGC
TTCTTCGAGC CCGCAGAGCA AGGGTTCGTT CGTAGCGGAA CAGTTCGAGG AGGTCATGCA
ATGACCACCA TGCCCACGTT ATACCTTGCC TTCGACGGCG TGCTTCATCC GAACTTAGTT
TCGTTTCACG GAGGGTGTGC ACCGCGCCTT CGCGCTGGCG GACATACGCT GTTCGAGAAC
AACACAATCC TCGAACAGCT CATGGATGCC TGCCCATCGA CCGTCGTCGT CCTGCACAAC
TGGTGGGTAC AGATTGTGGG CTACCAGGGT ACGTTGCGCC TGCTCCCCGA GTCCGTTCGC
TCGCACGTCA TTGGCTCTAC GTGGCGCGAA TGCAGGGGGC CTCGTGCCAG AGTGACCAAC
AATCGCTCGC GACGCGACTG GCTGCAAAAC GACCTTGTTC GGCGACAGCC TGAGCATCCT
GTGCTTGTCG ATTGCGACGC GCGTCAGGTT GTACCCCAAC TTCTCGACAG CGCCTGCATC
GTTGACAACT GGCGGGGGCT GACTGAACCA GGTGCGTGGG AGCGACTCGT GACCTTGCTG
ACGACGAGGC CGGAGCAGAC GCAGATCTCG GGGTATTCCT TGGACCCGCG GCACTTGAAG
GAACGCGTCG CCGCCTGA
 
Protein sequence
MRQLGSSCSF MGQQSSPSQD AVRREKLGSS ADRLPQPFYR FFEPAEQGFV RSGTVRGGHA 
MTTMPTLYLA FDGVLHPNLV SFHGGCAPRL RAGGHTLFEN NTILEQLMDA CPSTVVVLHN
WWVQIVGYQG TLRLLPESVR SHVIGSTWRE CRGPRARVTN NRSRRDWLQN DLVRRQPEHP
VLVDCDARQV VPQLLDSACI VDNWRGLTEP GAWERLVTLL TTRPEQTQIS GYSLDPRHLK
ERVAA