| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_5408 |
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| Symbol | |
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| ID | 4042269 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cupriavidus metallidurans CH34 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007974 |
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| Strand | + |
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| Start bp | 2148663 |
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| End bp | 2150183 |
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| Gene Length | 1521 bp |
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| Protein Length | 506 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637980826 |
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| Product | putative efflux outer membrane protein |
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| Protein accession | YP_587536 |
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| Protein GI | 94314327 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1538] Outer membrane protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGAAAAA GTAGCCAGCC CCTAGCCATC GCACTTGCTG CCACGCTGCT GACCACCGCC
TGCTCCACAG CGCCTAGCGT GCCCCAGCCC TACTCGAAGG AGGAAGTACG CCAGCGCGTG
GAAGAAGATC GGCGCGGCAT GTACAGCGAC CAGGAACCCG TCACCCGCCC GATCACGTTC
TACGAAGCCG CCGCGCGCGC GCTCAAGTAC AACCTCGACT ATCGCCTCAA GCTGATGGAG
AGCACGTTGT CGCGGCAGCT TGTGGACGTG ACCAAGCACG ACATGCTGCC GAAGCTCGTG
GCATCCGCTG GCTACACGCA TCGGTCGAAC GACTCGGGAG GTGTCTCGGT GGGGATCCAG
GACGGTCAGA TCAGCCTGCG GCCCTCCACC TCCGAACAGC GTTACCACCG TCTGGCCGAT
CTCGACCTGA CGTGGAGCAC GCTGGATTTC CTGGTGGCCT ACGAACGGAC CCAGCAAAAG
GCCGATCAGG TGCTGATGGC CGAGGAGCGC CGTCGCAAGG TCGTGCAGAA CGTGCTGCAG
GATGTCCGCA ATGCCTACTG GCGCGCGCTT GGCGCGCAAC GTCTGATCGG CCAGGTCGAC
GCATTGCTGA ACAAGGTTCG CCAGGGTCTG AAGGCCGCGC AGGAAGCCGA CGAAAAGGGC
CTGCTGCCGC GCCAGCAGGC GCTGGCCTAT CAGCGCGCGC TGCTCGATGC CGTCAGCCTG
CTGTCGGCGC GGCGTCAGGA CCTGGAACTG GCGCGCGCGG AACTGGCCGC CCTGATGTCG
CTGCCGCCGG ACCAGCCTTT CACGCTTGCC GACGAGGCCG AGCAGCGCAT GCCGAACGAT
CGGTTTGACG TCGCCGGGTT GGAACAGATG GCGCTCGAAA GCCGGCCGGA GATCATGGAA
GAGTGGTACC GCAAGCGCGT CACCGACAAC GACATCAAGA TCGCCAAGGC CGAACTGTGG
CCCAGCCTGT CCGTCGACCT GGGCGGCCAC TACGACTCGA ACGCCTACCT CTACAACAAC
GCGTGGTCCG CGATCGGCCT GCGCCTGTCG TACAACATCT TCAACCTGCT CAAGATCCCC
GTGCTCAACG AGGCGCAGGA CAGCCAGAAC AAGGTAGGCG ACCTGCGCCG CATGTCGCTG
TCCATGGCCG TGCTCACGCA GGTGCGCGTG GCGCTGCAAC GCTACCACCT GGCACTCGAG
CAGCTCGATT TCGCCGAGGA AAGCCTGCAG GTTGACAACC GCCTGCGCAG ATTCGCCGAG
GCCAGCGCCC AGGTATCGGC CGACTCGAGA CTCGAGTTCA TCCGTGCCGA TGCGCGCATG
TTGCTGGCGC AATACCAGCG CTACGCCGCC TACTCGGAGG CGCAGGCCGC CTGGGGACGT
CTCTACAACT CGGTTGGCCT CGACGTCATG CCGGACGCGA TCGCCAGCCA TGACGTCCCG
ACCCTCGCAT CGGAGATCGA ACAGACCATG CAGGGCTGGC AACAGAAGCT CTACCCAAGC
GCCGTCGATA GCAAATCATG A
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| Protein sequence | MRKSSQPLAI ALAATLLTTA CSTAPSVPQP YSKEEVRQRV EEDRRGMYSD QEPVTRPITF
YEAAARALKY NLDYRLKLME STLSRQLVDV TKHDMLPKLV ASAGYTHRSN DSGGVSVGIQ
DGQISLRPST SEQRYHRLAD LDLTWSTLDF LVAYERTQQK ADQVLMAEER RRKVVQNVLQ
DVRNAYWRAL GAQRLIGQVD ALLNKVRQGL KAAQEADEKG LLPRQQALAY QRALLDAVSL
LSARRQDLEL ARAELAALMS LPPDQPFTLA DEAEQRMPND RFDVAGLEQM ALESRPEIME
EWYRKRVTDN DIKIAKAELW PSLSVDLGGH YDSNAYLYNN AWSAIGLRLS YNIFNLLKIP
VLNEAQDSQN KVGDLRRMSL SMAVLTQVRV ALQRYHLALE QLDFAEESLQ VDNRLRRFAE
ASAQVSADSR LEFIRADARM LLAQYQRYAA YSEAQAAWGR LYNSVGLDVM PDAIASHDVP
TLASEIEQTM QGWQQKLYPS AVDSKS
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