Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rmet_5389 |
Symbol | |
ID | 4042250 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cupriavidus metallidurans CH34 |
Kingdom | Bacteria |
Replicon accession | NC_007974 |
Strand | - |
Start bp | 2114486 |
End bp | 2116684 |
Gene Length | 2199 bp |
Protein Length | 732 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 637980807 |
Product | oxidoreductase FAD/NAD(P)-binding |
Protein accession | YP_587517 |
Protein GI | 94314308 |
COG category | [P] Inorganic ion transport and metabolism [S] Function unknown |
COG ID | [COG0369] Sulfite reductase, alpha subunit (flavoprotein) [COG3182] Uncharacterized iron-regulated membrane protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTACGCA AGTTCCATCT GGTTCCAGGA CTCGTCGCCG CGTTGCTGAT GACGATCATC GCACTATCGG GCGCGGTGTT GTCGGTGAAT CCGGCGCTTG AACGTGTGGA TGCCGTTCGC GCGGGCCAGG CTTCGGTAAG CGTGGCCACG CTCGCGAGCC GCGTACAGAC GGAGATCCCG GGCGTCGAAG CGCTTGCGCG GCGGCCGTCG GGGACGTTCA TCGCGTATCA CGAGGTCGAC GGTCAGCAGC GCGCCTCGAT CATCGACCCT GCCAGCGGCA AGGCGACGGG AGACTATGTC ACCTCGCCGG TTTGGCGATG GATGAAGAAC CTGCATCGCA AGCTGTTTCT CGGCGACGCA GGCCGGATTG CGGCCGGCGT GACGGCCGCA TTCATGCTGC TCGTCACGAT TTCCGGGCTG GCGTTGCTCG CGCGGCGCAT GGGCGGGTGG AAGCACCTGC TCGGCCCGAT CCGCGGCAAC GGACTCCAGC GCGTGCACAA CGAGACCGCG CGCGTGGCGC TGCTAGGGCT GACGCTGTCG GCGGTGACCG GGCTTGTTAT GTCGATGACG ACATTCGGGC TGATACCGGA AGGCGGCGGC CAGGACCCTG TGCTCAGCGT GCCTGCGGCG GTGGCGCCGG CAATGCCGCT GGAGCGGATG CCCGCGCTGG GTATCGACAG CGCAGGCCTG CACCAACTGA CATTCGCCCA TGCCGATGCC CAGGGCGACG TCATCGAACT GGATACGACC GACGGCGTCG GGTATGTCGA TCCGGCGACG GGGAAGATGA CCGCCTTCCA GCCCACCGAC GGCTGGCAGC GCGTGCAGGC GGTTGTCCGC ATGTTGCATA CGGGCCAGGG GATGTGGTGG CTCGGGTTGA TGCTTGGTGC GTCGTCGCTG TCGGTGCCGG TGCTGGCAGT GACGGGCCTG CTGCTGTGGC TGCGTCGTCG GGGAACCATG CCGACCTTGG CCGGCAATGT GCCGGCACGC GACGCGGATA CGGTGTTGCT GGTGGGCTCC GAGGGCAACA CCACATGGGG CTTTGCTTCT GCGCTGCATG CCGCGTTGAC CGAGGCAGGC CTGCGCGTGC ATACCGCGCC GATGAATGAG CTGGCGGACA GCTATCGTGG GAAAAAGCGG CTGCTGGTCC TGACCGCCAC GTATGGCGAT GGCGATGCAC CCGAGAGCGC AAGTCACTTC CTGTCGAAGC TCAATCGCCT GACGGTCCCA ACCGATACCG ACTTTGCGGT GCTGGGGTTC GGTGATCGCC AGTTCCCCGC GTTCTGCGGC TATGCGAGCG CGGTGCACGA TGCGCTGCTG GGCAAGGGTC TGCGAGCCCT TGCCGATCCG GGCACGGTGG ACCGGCAGTC GGAGCCGGAA TTCCGGCAAT GGTGCGACTG GCTGGCCACG ACGCTCGGGT TGTCGCTTGA TATTCGCTAC ACGCCGATGC TGCCACCCAG CGTGCCGCTC AAGCTCCTCT CGCGTGAGGA CTACGGCGTC GGCGCTGAGG CGATGACCTC GGTCCTGCGC TTCGTCCCAG AGCAGCGTGC CACGCCGTTC CGGCCAGGGC TGCCCACGTT CGAGACCGGG GATCTGCTCG GCATCGTGCC GCCCGGCGCT ACGTCGCCCC GGTACTACTC GCTCGCGAGC GGCGCGGCGG ACGGTGTGGT GGAGATCTGC GTGCGGCGGC TGCCTGAAGG CGTGTGTTCC ACGTACCTCA CAGACCTGCG CCCCGGCGAC ACCATCGACG CATTTATCCG GCCGCACACG CGCTTCCGGC CCGAACCAGG CAATGCACCC GTGATCATGA TCGGGGCCGG CACCGGGATC GGCCCGTTGA TTGGCTTTAT CCGGCACAAC GCGGCACGCC GGCCCATGCA CCTGTACTTT GGGGCGCGCA ATGCCGAGGA CGGCTACCTG TATCGCGACG AGCTGAAGGG CCTGGTGGCC GACCAGCGGC TGCACGCGCT CACGACCGCG TTCTCACGTT CGGGCAACCG GACCTATGTG CAGGAAAGAC TGGTCGCCGA TGCGCAGAGC CTGCGCGGGT TGATGGCCCA CGGTGCGCAG ATCATGGTGT GCGGCGGCCG CAAGATGGCC GAGGGCGTGG CACAGGCGTG GGAGCGGATT CTGACGGACA CCGGCTTGTC CGTCGCGCAA CTCAAAGCGG AGGGACGCTA TGTCGAGGAC GTCTACTAA
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Protein sequence | MLRKFHLVPG LVAALLMTII ALSGAVLSVN PALERVDAVR AGQASVSVAT LASRVQTEIP GVEALARRPS GTFIAYHEVD GQQRASIIDP ASGKATGDYV TSPVWRWMKN LHRKLFLGDA GRIAAGVTAA FMLLVTISGL ALLARRMGGW KHLLGPIRGN GLQRVHNETA RVALLGLTLS AVTGLVMSMT TFGLIPEGGG QDPVLSVPAA VAPAMPLERM PALGIDSAGL HQLTFAHADA QGDVIELDTT DGVGYVDPAT GKMTAFQPTD GWQRVQAVVR MLHTGQGMWW LGLMLGASSL SVPVLAVTGL LLWLRRRGTM PTLAGNVPAR DADTVLLVGS EGNTTWGFAS ALHAALTEAG LRVHTAPMNE LADSYRGKKR LLVLTATYGD GDAPESASHF LSKLNRLTVP TDTDFAVLGF GDRQFPAFCG YASAVHDALL GKGLRALADP GTVDRQSEPE FRQWCDWLAT TLGLSLDIRY TPMLPPSVPL KLLSREDYGV GAEAMTSVLR FVPEQRATPF RPGLPTFETG DLLGIVPPGA TSPRYYSLAS GAADGVVEIC VRRLPEGVCS TYLTDLRPGD TIDAFIRPHT RFRPEPGNAP VIMIGAGTGI GPLIGFIRHN AARRPMHLYF GARNAEDGYL YRDELKGLVA DQRLHALTTA FSRSGNRTYV QERLVADAQS LRGLMAHGAQ IMVCGGRKMA EGVAQAWERI LTDTGLSVAQ LKAEGRYVED VY
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