Gene Rmet_5380 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRmet_5380 
Symbol 
ID4042241 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCupriavidus metallidurans CH34 
KingdomBacteria 
Replicon accessionNC_007974 
Strand
Start bp2106144 
End bp2106929 
Gene Length786 bp 
Protein Length261 aa 
Translation table11 
GC content67% 
IMG OID637980798 
Productcitrate synthase 
Protein accessionYP_587508 
Protein GI94314299 
COG category[C] Energy production and conversion 
COG ID[COG0372] Citrate synthase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCCAAC AAGACAAGCC GGTGACCCGG CTGTGCACCC ACACGCTGAC CAGCCTGCAC 
TATCGCGAGG CCGATCTCGT GGACGACCTT CTGGGCAAGA AGACCTTCAC CGAAGTCATG
CTGATGCAGA TCCTCGGCCG CACCCCGCGC CCGGTGGACA TGCGTATCGC CGACATGGTG
CTCGTGGTGC TGATGGAGCA CGGCCTGACG CCAAGCGCCA TCGCCACGCG CCTGATCTAC
ATGAGCGCGC CAGAGAACCT GCAAGGCGCC GTGTCGGCTG GCCTGCTGGC GGTTGGCAGT
TCGTTCGTCG GCACGATGGA GAACTGCTCG ACGTTGCTGG ACCGCATTCT GGCGGCACAG
GACCCCGATG CCGAAGCACT GTCCATCGCG CGCCACTACA AGGAAATGCG GGCGGCCGTG
CCGGGTTTTG GCCATCACCT GCACAAGCCG GTGGACCCGC GCGCGTACAA GCTGCTGGAA
CTCGGCGATG CGGAGCCGGA TCTGGCCGGC GCGCATATCG GTGCCCTGAG ACGCCTGTCG
GCGGCGGTTG ACGAAGTGGC GGGGCGGCCG ATCACGATCA ATGCCACGGG GTCGGTGGCC
GCGCTGCTTG GCGAGATTGG CGTGCCGACG GCGGTGATGC GGGGGTTCGC GGTGATCTCC
CGCGCGGCTG GGCTCGTGGC CCATATCGTC GAGGAGCAGC AGAGCCCGTC GGGACGCTAT
ATCTGGGACG TGGTCGAGGA GGCCATCCCG TACGTCGGCA ACGCGCCGCA CGGAGACCAC
GCATGA
 
Protein sequence
MSQQDKPVTR LCTHTLTSLH YREADLVDDL LGKKTFTEVM LMQILGRTPR PVDMRIADMV 
LVVLMEHGLT PSAIATRLIY MSAPENLQGA VSAGLLAVGS SFVGTMENCS TLLDRILAAQ
DPDAEALSIA RHYKEMRAAV PGFGHHLHKP VDPRAYKLLE LGDAEPDLAG AHIGALRRLS
AAVDEVAGRP ITINATGSVA ALLGEIGVPT AVMRGFAVIS RAAGLVAHIV EEQQSPSGRY
IWDVVEEAIP YVGNAPHGDH A