Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rmet_5380 |
Symbol | |
ID | 4042241 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cupriavidus metallidurans CH34 |
Kingdom | Bacteria |
Replicon accession | NC_007974 |
Strand | - |
Start bp | 2106144 |
End bp | 2106929 |
Gene Length | 786 bp |
Protein Length | 261 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 637980798 |
Product | citrate synthase |
Protein accession | YP_587508 |
Protein GI | 94314299 |
COG category | [C] Energy production and conversion |
COG ID | [COG0372] Citrate synthase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCCAAC AAGACAAGCC GGTGACCCGG CTGTGCACCC ACACGCTGAC CAGCCTGCAC TATCGCGAGG CCGATCTCGT GGACGACCTT CTGGGCAAGA AGACCTTCAC CGAAGTCATG CTGATGCAGA TCCTCGGCCG CACCCCGCGC CCGGTGGACA TGCGTATCGC CGACATGGTG CTCGTGGTGC TGATGGAGCA CGGCCTGACG CCAAGCGCCA TCGCCACGCG CCTGATCTAC ATGAGCGCGC CAGAGAACCT GCAAGGCGCC GTGTCGGCTG GCCTGCTGGC GGTTGGCAGT TCGTTCGTCG GCACGATGGA GAACTGCTCG ACGTTGCTGG ACCGCATTCT GGCGGCACAG GACCCCGATG CCGAAGCACT GTCCATCGCG CGCCACTACA AGGAAATGCG GGCGGCCGTG CCGGGTTTTG GCCATCACCT GCACAAGCCG GTGGACCCGC GCGCGTACAA GCTGCTGGAA CTCGGCGATG CGGAGCCGGA TCTGGCCGGC GCGCATATCG GTGCCCTGAG ACGCCTGTCG GCGGCGGTTG ACGAAGTGGC GGGGCGGCCG ATCACGATCA ATGCCACGGG GTCGGTGGCC GCGCTGCTTG GCGAGATTGG CGTGCCGACG GCGGTGATGC GGGGGTTCGC GGTGATCTCC CGCGCGGCTG GGCTCGTGGC CCATATCGTC GAGGAGCAGC AGAGCCCGTC GGGACGCTAT ATCTGGGACG TGGTCGAGGA GGCCATCCCG TACGTCGGCA ACGCGCCGCA CGGAGACCAC GCATGA
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Protein sequence | MSQQDKPVTR LCTHTLTSLH YREADLVDDL LGKKTFTEVM LMQILGRTPR PVDMRIADMV LVVLMEHGLT PSAIATRLIY MSAPENLQGA VSAGLLAVGS SFVGTMENCS TLLDRILAAQ DPDAEALSIA RHYKEMRAAV PGFGHHLHKP VDPRAYKLLE LGDAEPDLAG AHIGALRRLS AAVDEVAGRP ITINATGSVA ALLGEIGVPT AVMRGFAVIS RAAGLVAHIV EEQQSPSGRY IWDVVEEAIP YVGNAPHGDH A
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