| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_5356 |
|---|
| Symbol | |
|---|
| ID | 4042217 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cupriavidus metallidurans CH34 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007974 |
|---|
| Strand | - |
|---|
| Start bp | 2076957 |
|---|
| End bp | 2077922 |
|---|
| Gene Length | 966 bp |
|---|
| Protein Length | 321 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 637980774 |
|---|
| Product | extra-cytoplasmic solute receptor |
|---|
| Protein accession | YP_587484 |
|---|
| Protein GI | 94314275 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG3181] Uncharacterized protein conserved in bacteria |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.018742 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 25 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGGCGTT TGCTTCTCGC CTGTCTGATT GCCACGCTCG GGGTCTCCGG GCTGGCGCAC
GCCAACGCGA ACAATTACCC CAGAAAGCCC GTCAAGATCG TGGTGTCGTT CCCGCCTGGC
ACGGGCTCGG ACAGCAGCGC GCGGTTCCTG GCCCAGAAAC TCGAGGCGCG CTTTGGCCAG
CCTTTCGTGG TGGAAAATCG TCCGGGTGCC AACAGCTTCA TCGCCGCGCA GACGGTGGCG
AAGGCGGACC CGGATGGCTA CACGTTGTTC GTGGCGAGCA ATTCGCCGAT GGCGACCAAC
GTGGTCCAGT TCAAGACGCT GCCCTATGAC CCGGTACGCG ATTTCGCGCC CGTGGCGCGG
CTTTACTACG GGGCGATGAT CCTGTCGGTG CGCGCCGATT CGCCCTACAA GACCGTTGCC
GATCTGGTGG CCGCTGCCAA GGTGAAGCCC GGCAAGCTCA GCTACGGCTC GGGTTCCGCG
TCGTACCAGA TTGCCACCGA GCTGTTCATG AAGCAGGCCG GTATCACTGC CGTGGCCATC
CCGTACAAGG GCGCTGCCCC GGCTGTCGCA GATCTCGCCG GTGGCCAGGT GGACTTCGCG
ATGTCGGATT ACCTTGCCGC TTCCGCGCTG TCGCAGGCCG GCAAGACACG CATCATCGCC
GTGGGCGGCG ACAAGCGACT GCCGTTGGAG CCCAATGTGC CGACGCTGCA GGAACTCGGC
TACAAGGACT ACTACATGGT GAACTGGGTG GCGCTGTTCG CGCCGGCGAA GACGCCGCCC
GCGATCGTCA AGAAACTCAG CGACGCCACG GTCGAGATCA TTAGCAGCAA GGAAGCGGCG
GAGTTCGTGG GCCGCACCAG CGGCCAGATC TTCGCGGGTG GGTCGGAGGT GCTGCGGAAA
TACCAACTCG ACGAAATCCA GCGCTGGACG AAGGCCGCGG AAATCGCGGG TATTCCGAAG
GAGTGA
|
|---|
| Protein sequence | MRRLLLACLI ATLGVSGLAH ANANNYPRKP VKIVVSFPPG TGSDSSARFL AQKLEARFGQ
PFVVENRPGA NSFIAAQTVA KADPDGYTLF VASNSPMATN VVQFKTLPYD PVRDFAPVAR
LYYGAMILSV RADSPYKTVA DLVAAAKVKP GKLSYGSGSA SYQIATELFM KQAGITAVAI
PYKGAAPAVA DLAGGQVDFA MSDYLAASAL SQAGKTRIIA VGGDKRLPLE PNVPTLQELG
YKDYYMVNWV ALFAPAKTPP AIVKKLSDAT VEIISSKEAA EFVGRTSGQI FAGGSEVLRK
YQLDEIQRWT KAAEIAGIPK E
|
|---|
| |