Gene Rmet_5334 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRmet_5334 
Symbol 
ID4042195 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCupriavidus metallidurans CH34 
KingdomBacteria 
Replicon accessionNC_007974 
Strand
Start bp2046113 
End bp2046835 
Gene Length723 bp 
Protein Length240 aa 
Translation table11 
GC content65% 
IMG OID637980752 
ProductMgtC/SapB family transporter 
Protein accessionYP_587462 
Protein GI94314253 
COG category[S] Function unknown 
COG ID[COG1285] Uncharacterized membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.000795901 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCATCG AAGCCATCCA GAACATCAAC CTAGAGTCGC TCCTCGACAC CAGCATCAGC 
CTGGTTACCG CCTTCGTGCT TGGCGGGGTC ATCGGCTATG AACGCCAGTA CCGCCAGCGC
ACCGCCGGCC TGCGCACCAA CGTGCTGGTC GCCGTGGGCG CGGCCATTTT CGTCGACATG
GCCAACCGGC TGGCCGGCCA CGACGGCGCG GTGCGCGTGG TGGCCTACGT GGTATCCGGC
ATCGGCTTTC TTGGTGCAGG CGTGATCATG CGCGAGGAAG GCAATGTGCG CGGCCTGAAC
ACCGCAGCCA CGCTGTGGGG CTCCGCCGCG GTCGGCGCCA GCGCGGGCGC AGACCTGATC
ATCGAGGCCG GCTTGGGCAG CATGTTCGTG CTCGCCGCCA ACACGCTGCT GCGTCCCGTG
GTCAATCGCA TCAACCAGCA GCCAATCGAC ACGCCTGCGG TCGAGGTGAC CAACACGGTC
TACGTGATCA CGCCGCGCCA TCGCCAGAAA GAGGCATTGC GGCTGCTGTC GGACATGCTG
GAAGCCAGCA ACCATCCCAC GCGCGATCTG GTGGTTCACG CATTCGGCGC GAACGATATC
GAGATCGAAG CCGTGCTCAT GGCCACTTCA GTCGACGGCG ACGAGCTGGA TGCCGTGGTG
GCGCGGCTTT CGGCATGTGA AGCGGTAACC CAGGCGTTCT GGAGTCCGAG CACCACGGAA
TAG
 
Protein sequence
MSIEAIQNIN LESLLDTSIS LVTAFVLGGV IGYERQYRQR TAGLRTNVLV AVGAAIFVDM 
ANRLAGHDGA VRVVAYVVSG IGFLGAGVIM REEGNVRGLN TAATLWGSAA VGASAGADLI
IEAGLGSMFV LAANTLLRPV VNRINQQPID TPAVEVTNTV YVITPRHRQK EALRLLSDML
EASNHPTRDL VVHAFGANDI EIEAVLMATS VDGDELDAVV ARLSACEAVT QAFWSPSTTE