Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rmet_5334 |
Symbol | |
ID | 4042195 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cupriavidus metallidurans CH34 |
Kingdom | Bacteria |
Replicon accession | NC_007974 |
Strand | + |
Start bp | 2046113 |
End bp | 2046835 |
Gene Length | 723 bp |
Protein Length | 240 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 637980752 |
Product | MgtC/SapB family transporter |
Protein accession | YP_587462 |
Protein GI | 94314253 |
COG category | [S] Function unknown |
COG ID | [COG1285] Uncharacterized membrane protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.000795901 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCCATCG AAGCCATCCA GAACATCAAC CTAGAGTCGC TCCTCGACAC CAGCATCAGC CTGGTTACCG CCTTCGTGCT TGGCGGGGTC ATCGGCTATG AACGCCAGTA CCGCCAGCGC ACCGCCGGCC TGCGCACCAA CGTGCTGGTC GCCGTGGGCG CGGCCATTTT CGTCGACATG GCCAACCGGC TGGCCGGCCA CGACGGCGCG GTGCGCGTGG TGGCCTACGT GGTATCCGGC ATCGGCTTTC TTGGTGCAGG CGTGATCATG CGCGAGGAAG GCAATGTGCG CGGCCTGAAC ACCGCAGCCA CGCTGTGGGG CTCCGCCGCG GTCGGCGCCA GCGCGGGCGC AGACCTGATC ATCGAGGCCG GCTTGGGCAG CATGTTCGTG CTCGCCGCCA ACACGCTGCT GCGTCCCGTG GTCAATCGCA TCAACCAGCA GCCAATCGAC ACGCCTGCGG TCGAGGTGAC CAACACGGTC TACGTGATCA CGCCGCGCCA TCGCCAGAAA GAGGCATTGC GGCTGCTGTC GGACATGCTG GAAGCCAGCA ACCATCCCAC GCGCGATCTG GTGGTTCACG CATTCGGCGC GAACGATATC GAGATCGAAG CCGTGCTCAT GGCCACTTCA GTCGACGGCG ACGAGCTGGA TGCCGTGGTG GCGCGGCTTT CGGCATGTGA AGCGGTAACC CAGGCGTTCT GGAGTCCGAG CACCACGGAA TAG
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Protein sequence | MSIEAIQNIN LESLLDTSIS LVTAFVLGGV IGYERQYRQR TAGLRTNVLV AVGAAIFVDM ANRLAGHDGA VRVVAYVVSG IGFLGAGVIM REEGNVRGLN TAATLWGSAA VGASAGADLI IEAGLGSMFV LAANTLLRPV VNRINQQPID TPAVEVTNTV YVITPRHRQK EALRLLSDML EASNHPTRDL VVHAFGANDI EIEAVLMATS VDGDELDAVV ARLSACEAVT QAFWSPSTTE
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