| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_5329 |
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| Symbol | zneA |
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| ID | 4042190 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cupriavidus metallidurans CH34 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007974 |
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| Strand | - |
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| Start bp | 2038970 |
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| End bp | 2042089 |
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| Gene Length | 3120 bp |
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| Protein Length | 1039 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637980747 |
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| Product | heavy metal cation tricomponent efflux pump ZneA |
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| Protein accession | YP_587457 |
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| Protein GI | 94314248 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG3696] Putative silver efflux pump |
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| TIGRFAM ID | [TIGR00914] heavy metal efflux pump (cobalt-zinc-cadmium) |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.259593 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATTGAGC GCCTTGTTAC CCTGTGCTTC AACCGGCGCG GCATCGTCGC GCTGGTGTTC
GCGATGGTCG CGCTGTACGG CTGGTACGCG TGGAAGCAGC TGCCCCTGGA AGCGTATCCG
GACATTGCCG ACACCACCTC GCAGGTGGTC ACGCAGGTCA ACGGACTGGC CGCCGAGGAA
GTCGAACAGC AGATCACAAT CCCGCTCGAG CGCGAAATCA TGGGCGTGCC CGGCATGCAC
GTGATGCGCT CCAAGAGCAC GTTCGGCCTG TCCCTGATCA CCGTGGTGTT CAAGGACGGC
GCGGAGGACT ACTGGTCGCG CCAGCGCCTG CAGGAGCGCA TCAACGGCGT TTCGCTGCCG
TACGGCGCGC AGCCGTCGCT TGACCCGCTG ACGTCACCGA TCGGTGAAAT CTACCGCTAT
ACGCTCGTCT CGAAGACACG CGATCTGCGC GAGCTGTCGG AACTCCAGTT CTGGAAGGTG
ATTCCGCGCC TGAAGCAGGT GGCGGGCGTG GTGGACGTGG CCAACTTCGG CGGCCTGACC
ACGCAGTTCA TGCTCGAGTT CGATCCGGTG ATGCTGTCGA AGTACAACAT CTCGCTGAAC
CAGATCACGC AGGCGATCTC CGAGAACAAT GCCAACGCCG GCGGCAGCAT CCTGAATCGT
GGCGAGCAAG GGCTCGTGGT GCGCGGCGTG GGCCTGATCC GTAATCTGGA CGATCTGGGC
AACATCGTTG TCACCCAGAA GAATGGCGTA CCCGTGCTGG TGAAGGATCT TGGCCGTGTG
GTGCTCGGCA ACCCGCAGCG CCATGGCATC CTGGGCATGG ACCGCAATCC GGACACGATC
CAGGGCATCA CGCTGTTGCT CAAGAACGAG AATCCGTCGG TCGTGATGGA GGGTGTTCAT
GCCGCCGTGC GTGACCTGAA CGACAACATC CTGCCCAAGG ACGTCAAGGT GGTGCCGTAT
ATCGACCGGA GCAATCTCGT CGATGCCACG GTGCATACCG TGGGCAAGAC GCTGATGGAA
GGCATGTTCC TGGTGTCGCT GGTGCTGCTG CTGTTCCTGG GCAGCCCGCG CGCGGCGATC
ATCGTGGCCG TCACGATCCC GCTGTCGCTG CTGATGGCGT TTATCCTGAT GCATCACTTC
AAGATCCCGG CGAACCTGCT TTCGCTCGGC GCGATCGACT TCGGCATCAT CGTGGACGGC
GCCATCGTGG TGATGGAGAA CATCCTGCGC CGGCGCGAGG AGGACGCGGA GAAAGAACTG
CATGGCCGAG ACATCATGCA GTCGGTGTTG CAGGTGGCGC GCCCGATCTT CTTCGGCATG
ATCGTGATCA TCACGGCCTA CCTGCCGTTG TTCGCGTTCC AGCGCATCGA GTACAAGCTG
TTCTCGCCAA TGGCCTTCGC CGTGGGTTTC GCGCTGTTCG GGGCGTTGCT GGTCGCGCTG
CTGCTGATTC CGGGGCTGGC GTACTGGGCC TATCGCAAGC CGCGCAAGGT GTTTCACAAC
CCGGCGCTGG TCTGGCTCGC GCCGCGCTAT GAATCGGTGC TGAACCGGCT GGTGGGCAGC
ACGCGCACGG CAATCGGTAT CGCGGTGGCA ACGCTGGTCG GGGTGATGAT CCTCGGCGCG
ACGATCGGGC GGGACTTCCT GCCGTATCTG GACGAAGGCT CGATATGGCT GCAGGTGACG
CTCCCGCCTG GCATCTCGCT CGAAAAGGCT GGCCAGATGG CCGATAACCT GCGTGCCGCG
ACGATGGAGT TCCCGGAGGT GGAGCACGTG GTGACGCAGG TGGGCCGCAA CGACGAGGGT
ACCGATCCGT TCTCGCCGTC ACATATCGAG ACCGCGGTGA CGCTGCACCC GTATAGCACC
TGGACCTCCG GCCGCGACAA GCAGCAACTG ATCGAGGCCA TGGCCACGCG CTTCCGCGAT
CTGCCGGGTA CTCAGGTGGG TTTCTCCCAG CCGATGATCG ACGGTGTGCT CGACAAGCTG
GCGGGCGCGC ACAGCGACCT GGTGGTCAAG GTGTACGGCA ACGACTTCGC CGAGACCCGG
CAGGTGGCCA CCGCGATCAC GCGGCTGCTG AAGACGGTGC CGGGCGCGCA GGACGTGATC
ATCGATCAGG AGCCGCCGCT GCCGCAGGTG CGTATCGATG TCGATCGCGC CGCCGCCGCG
CGGCTGGGCA TCAATGTGGC CGACGTGATG GCGCTGATCC AGACAGGGAT CGGTGGCAGC
CCCGTCACGC AGGTGTTTGT CGAGGACCGC AGCTACAACG TGGTGGCGCG CTTCATCGGC
AGCTCGCGCA ACGACCCCGA GGCAATCGGC AACCTGACGC TCACGGCCGC CAATGGCGCG
CATGTGGCGC TGGCCCAAGT GGCGCATATT CGTCTGGCCG AAGGCGAGAC CACGATCACG
CGCGAGATGA ACAAGCGGCA CCTGACGGTG CGCCTGAATC TGCGCGGCCG CGATCTGTCG
ACGTTCCTTG AAGAGGCGCG GATGCGTATA GACAAGGAAG TACCGTACGA CCGTACCCAT
ATCCAGGTGG CATGGGGCGG TCAGTTCGAG AACCAGCAGC GCGCCCAGGC ACGTCTGGCG
GTGATCCTGC CGATGGTGCT GGCGCTGATG TTCGTGCTGC TGTTCGGCGA GTTCAAGAAC
CTGCGGCAGC CCGCGCTGAT CCTGATGGCG GTGCCGCTGG CAACGTTGGG CGGATTGGTT
GCGCTGCATC TGCGCGGGAT GACGCTGAAC GTGTCGTCGG CGGTTGGCTT CATCGCGCTG
TTCGGCGTGG CGGTATTGAA CGCGATCATC ATGATCGCCA ACCTGAACCG GTGGCGCGAT
ACCTCTGGCG TGAGCCTGAA GGAAGCGGTC GTGCGTGGCG CGGGCGAGCG GATGCGGCCG
GTGCTGATGA CCGCGACCGT GGCAGCGCTG GGCCTGATTC CGGCGGCGCT TGCGCACGGG
CTGGGCAGCG ACGTGCAGCG TCCACTGGCC ACGGTGGTGG TGGGCGGGCT GATCACGGCA
ACCGCGCTGA CGCTGGTGCT GTTGCCCGCG TTGTATTACC TGATCGAGAC ACGCGCGGCG
AAGCAGGTGC GCGAGGAGCC GCCGGTACAG TTCGGCCCCA CCAGTGAAGG GGATTTGTAA
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| Protein sequence | MIERLVTLCF NRRGIVALVF AMVALYGWYA WKQLPLEAYP DIADTTSQVV TQVNGLAAEE
VEQQITIPLE REIMGVPGMH VMRSKSTFGL SLITVVFKDG AEDYWSRQRL QERINGVSLP
YGAQPSLDPL TSPIGEIYRY TLVSKTRDLR ELSELQFWKV IPRLKQVAGV VDVANFGGLT
TQFMLEFDPV MLSKYNISLN QITQAISENN ANAGGSILNR GEQGLVVRGV GLIRNLDDLG
NIVVTQKNGV PVLVKDLGRV VLGNPQRHGI LGMDRNPDTI QGITLLLKNE NPSVVMEGVH
AAVRDLNDNI LPKDVKVVPY IDRSNLVDAT VHTVGKTLME GMFLVSLVLL LFLGSPRAAI
IVAVTIPLSL LMAFILMHHF KIPANLLSLG AIDFGIIVDG AIVVMENILR RREEDAEKEL
HGRDIMQSVL QVARPIFFGM IVIITAYLPL FAFQRIEYKL FSPMAFAVGF ALFGALLVAL
LLIPGLAYWA YRKPRKVFHN PALVWLAPRY ESVLNRLVGS TRTAIGIAVA TLVGVMILGA
TIGRDFLPYL DEGSIWLQVT LPPGISLEKA GQMADNLRAA TMEFPEVEHV VTQVGRNDEG
TDPFSPSHIE TAVTLHPYST WTSGRDKQQL IEAMATRFRD LPGTQVGFSQ PMIDGVLDKL
AGAHSDLVVK VYGNDFAETR QVATAITRLL KTVPGAQDVI IDQEPPLPQV RIDVDRAAAA
RLGINVADVM ALIQTGIGGS PVTQVFVEDR SYNVVARFIG SSRNDPEAIG NLTLTAANGA
HVALAQVAHI RLAEGETTIT REMNKRHLTV RLNLRGRDLS TFLEEARMRI DKEVPYDRTH
IQVAWGGQFE NQQRAQARLA VILPMVLALM FVLLFGEFKN LRQPALILMA VPLATLGGLV
ALHLRGMTLN VSSAVGFIAL FGVAVLNAII MIANLNRWRD TSGVSLKEAV VRGAGERMRP
VLMTATVAAL GLIPAALAHG LGSDVQRPLA TVVVGGLITA TALTLVLLPA LYYLIETRAA
KQVREEPPVQ FGPTSEGDL
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