| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_5314 |
|---|
| Symbol | |
|---|
| ID | 4042175 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cupriavidus metallidurans CH34 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007974 |
|---|
| Strand | + |
|---|
| Start bp | 2021841 |
|---|
| End bp | 2022263 |
|---|
| Gene Length | 423 bp |
|---|
| Protein Length | 140 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 637980732 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_587442 |
|---|
| Protein GI | 94314233 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG2259] Predicted membrane protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.00525142 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
|---|
| Fosmid unclonability p-value | 0.577317 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCTTCCT CGATGCCTTC GCTGTCATCC GCCGGCGATA GCCCTCACCG GCTGCCGCGC
TGGCTGCACT GGGTCGCGTT GTTGCTGCTG TGCGCGGCCT ACCTGCAGGG CGGACTGGTC
AAGCTGTTCG ACTTTCCCAG CGCGATGGCC GAGATGCAGC ACTTCGGCCT GTCGCCGGCT
GGCCCGCTGG CGGCGGGAAC CATCGCGCTG GAACTGGGCG CATCGGCCAT GATCCTGAGC
GGACGCGGCC GTTGGCTCGG CGCGCTGGCG CTGGCCGCAT TCACACTGGC AGCGACATTC
CTGGCCAACA GCTTCTGGAG CGCTCCGCCC GATGCCCGTT TCGGCATGGC AAATGCATTC
TTCGAGCACC TGGGTCTGGT CGGCGGCTTC GTGCTGGTGG CCTGGCATGA CCTGCGAGCG
TAG
|
|---|
| Protein sequence | MPSSMPSLSS AGDSPHRLPR WLHWVALLLL CAAYLQGGLV KLFDFPSAMA EMQHFGLSPA
GPLAAGTIAL ELGASAMILS GRGRWLGALA LAAFTLAATF LANSFWSAPP DARFGMANAF
FEHLGLVGGF VLVAWHDLRA
|
|---|
| |