Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rmet_5272 |
Symbol | |
ID | 4042133 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cupriavidus metallidurans CH34 |
Kingdom | Bacteria |
Replicon accession | NC_007974 |
Strand | + |
Start bp | 1971643 |
End bp | 1972362 |
Gene Length | 720 bp |
Protein Length | 239 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 637980690 |
Product | hypothetical protein |
Protein accession | YP_587400 |
Protein GI | 94314191 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG0684] Demethylmenaquinone methyltransferase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 0.132847 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.0555869 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCCGAGC TCACCCCTGC CCTGCGCGCC GCGCTGAAAA CCGTCAGCAC CGCCACGCTG TGCACCGCGC TGTTCAAGCG CGGGCTGCGC AACCAGTTCA TCCAGGACGT GCGGCCGATC CAGTCCAACC CCGGCACGAT GGTCGGCGAA GCGTTCACGC TGCGCTATAT CCCGGCGCGC GAGGACCTGA ATCCGATCAC CGTGTTCCAG GACCCGAACC ATCCGCAACG CCAGGCCATC GAGCAATGCC CGCCCGGCGC GGTGCTGGTC ATCGACAGCA GGAAAGACGC GCGCGCCGCA TCCGCGGGCT CGATCCTGGT GACCCGACTG ATGCAACGTG GCGGCGCCGG CATCGTGACC GACGGCGGCT TCCGCGATTC TCCTGAAATC GCGCAGATGG CGATGCCCGC CTATCACCAT CGCCCATCTG CCCCGACCAA TCTCACGCTC CACCAGGCGC TGGAATTCAA CGTGCCGATC GGCTGCGGCG ATGTGGCGGT GTTTCCCGGC GATGTGATCG TCGGCGACGC GGAAGGCGTG GTCGTGATCC CGCAGGAAAT GGTGGAGGAC ATCGCCGCCG AAGCGGTGGA GATGACCGCG TTCGAGGACT TCGTGACCGA GGAGGTACGC AAGGGCCGCT CGATCATCGG GCTGTATCCG CCCACCACCG AAAAAGCGCG CGAGGATTTC GCGGTCTGGC GGAAGGAAAA CAGGCGGTAA
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Protein sequence | MSELTPALRA ALKTVSTATL CTALFKRGLR NQFIQDVRPI QSNPGTMVGE AFTLRYIPAR EDLNPITVFQ DPNHPQRQAI EQCPPGAVLV IDSRKDARAA SAGSILVTRL MQRGGAGIVT DGGFRDSPEI AQMAMPAYHH RPSAPTNLTL HQALEFNVPI GCGDVAVFPG DVIVGDAEGV VVIPQEMVED IAAEAVEMTA FEDFVTEEVR KGRSIIGLYP PTTEKAREDF AVWRKENRR
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