Gene Rmet_5272 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRmet_5272 
Symbol 
ID4042133 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCupriavidus metallidurans CH34 
KingdomBacteria 
Replicon accessionNC_007974 
Strand
Start bp1971643 
End bp1972362 
Gene Length720 bp 
Protein Length239 aa 
Translation table11 
GC content66% 
IMG OID637980690 
Producthypothetical protein 
Protein accessionYP_587400 
Protein GI94314191 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0684] Demethylmenaquinone methyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.132847 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.0555869 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCGAGC TCACCCCTGC CCTGCGCGCC GCGCTGAAAA CCGTCAGCAC CGCCACGCTG 
TGCACCGCGC TGTTCAAGCG CGGGCTGCGC AACCAGTTCA TCCAGGACGT GCGGCCGATC
CAGTCCAACC CCGGCACGAT GGTCGGCGAA GCGTTCACGC TGCGCTATAT CCCGGCGCGC
GAGGACCTGA ATCCGATCAC CGTGTTCCAG GACCCGAACC ATCCGCAACG CCAGGCCATC
GAGCAATGCC CGCCCGGCGC GGTGCTGGTC ATCGACAGCA GGAAAGACGC GCGCGCCGCA
TCCGCGGGCT CGATCCTGGT GACCCGACTG ATGCAACGTG GCGGCGCCGG CATCGTGACC
GACGGCGGCT TCCGCGATTC TCCTGAAATC GCGCAGATGG CGATGCCCGC CTATCACCAT
CGCCCATCTG CCCCGACCAA TCTCACGCTC CACCAGGCGC TGGAATTCAA CGTGCCGATC
GGCTGCGGCG ATGTGGCGGT GTTTCCCGGC GATGTGATCG TCGGCGACGC GGAAGGCGTG
GTCGTGATCC CGCAGGAAAT GGTGGAGGAC ATCGCCGCCG AAGCGGTGGA GATGACCGCG
TTCGAGGACT TCGTGACCGA GGAGGTACGC AAGGGCCGCT CGATCATCGG GCTGTATCCG
CCCACCACCG AAAAAGCGCG CGAGGATTTC GCGGTCTGGC GGAAGGAAAA CAGGCGGTAA
 
Protein sequence
MSELTPALRA ALKTVSTATL CTALFKRGLR NQFIQDVRPI QSNPGTMVGE AFTLRYIPAR 
EDLNPITVFQ DPNHPQRQAI EQCPPGAVLV IDSRKDARAA SAGSILVTRL MQRGGAGIVT
DGGFRDSPEI AQMAMPAYHH RPSAPTNLTL HQALEFNVPI GCGDVAVFPG DVIVGDAEGV
VVIPQEMVED IAAEAVEMTA FEDFVTEEVR KGRSIIGLYP PTTEKAREDF AVWRKENRR