| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_5235 |
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| Symbol | |
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| ID | 4042096 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cupriavidus metallidurans CH34 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007974 |
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| Strand | + |
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| Start bp | 1932692 |
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| End bp | 1935085 |
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| Gene Length | 2394 bp |
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| Protein Length | 797 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637980653 |
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| Product | hypothetical protein |
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| Protein accession | YP_587363 |
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| Protein GI | 94314154 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG3914] Predicted O-linked N-acetylglucosamine transferase, SPINDLY family |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.050699 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.568835 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCCATGT CCTTGTCCTT GTCCAGTCCC GAAGTCTCGG AAGTCCTACC TCAGGCGCAG
CAGCAGGAGC AGGATGTCCT GCTGATTCTG CAAAGCGCTC TTGAGTTACA GCAAGCCGGC
GCTTATGAGG ATGCGCGGGC CCTGTACGAG ATCATCATCG GCGCCGTGCC AATGCACGCC
GATGCCCAAT ATGGCTACGC GATGCTCAAG GTGCAGATGG GCGAACCGGC GGACTCGCTG
CGTAACTTCG AGGTCGCCCT CGGCCTCAGC CCCGACAACC GGCACTATTG GGTCAACTAC
ATCAGCGCGC TGTTCCAGAG CGGCCAGGCA TCCGCTGCCT GGATCGCACT CGATCTCGCG
CAGCAGCGCG GGGTCAAGGG CCCCGACCTC GATTGGCTGA TCACGCAAAT GGCGCGGTCG
AATGCGTCGC CGGCGCCGGC TGCTGTGGCA ATGCCTGCCA CCACACCCAA TGGCACCACG
CCGGCCGCCA CGCCTGGCGC CCCGGATCAA GCCGTCGGCA ACGCATCCGG CACAGCCACC
GCGAGCGGCG ACAAGCGCAA GGCGCCATCC TCGAAAGTGA ACAAGGTCAA CGCCTTGATC
CAGGACCGGC AACTTGAGGA AGCGATAGCG TATGCCCGCG GCCTGACGGC CGAGTACCCG
TCAGATGGCA CGGCATGGGG CGCACTCGGC CTTGCCCTGC ATCAGGTAGG ACACTTTCAG
GATATCGTCG ACGCAGCCAG TCGCTCGGTG GAACTGCAGC CCAACGACCT GGTGATCCGC
AGACTGCTTG CCAACGCATT ACGCGAAATC GGCCGCCTGT CGGAATCCGA AGCACATTGC
CGCCACATTC TCTCGACGGC CCCGGACGAC GCCAACACAC TATGGCACCT CGGGAGCGTA
CTGCACTGCC AGAAGCGGTA TGACGAAGCG GCCGTCGCTG GCCGGCGTGC TGTCGAACTT
GCGCCCAATA ACGCGCTGGC CCACCTCAGC TTCGGCATGG TGCAGATCGA CAGGGGCCAG
GTAGCCGAGG CCCTTGGGCA TCTGCAAACG GCGATTGAGC TTGACTCGAA CAATACCAAG
AACAACAGTG CCGTTCTGTT CCGCCTGACC CACTGCGATG CCATTGATAC GGCAACCCTG
ACCGAAGCGC ATTTCGCCTA TGGCAAGCGG AACGCGATCC GGACCAGCCC GAAGCGGCAC
GCGAACGTCC CCGACCCCCG TCGAAAGCTC CGGATCGGGC TTGTATCCGG TGATCTCTAC
AACCATGCTG TCAGTACGTA TCTTGGGGCC GTTGTCGAGT ATCTGGCGAA GGACCCGAGT
GTCTCGCTGC ACTTCTACTA CAACTTCACG ATCGAAGACG AGGTCACCAG TTTCCTGCAA
GCGCACGCGG CATCGTGGAC GGTCGTGACC AGGATGAACG ATGTCGGCTT TGCCGCGACG
GTCCGCCGCG ATGAGATCGA CATCCTGATC GACCTGTCAG GCCATACGAA CCACAATCGC
TTGCCTGCGT TCGCTCGGAA ACCTGCGCCA ATCCAGGTGA CATGGCTTGG ATATCCGGCG
ACGACCGGAC TCGACGCCAT GGACTATTTC CTGGCCGACC GCCACAGCAC ACCACCAGGA
CTATTTGACG CGCAGTTCAG CGAGAAGATC GTCCTGCTGC CAGCAGTCGC GCCCTATTGC
CCGACTGCCG CCTCCCCACC TGTCAACACC CTGCCTGCCC TGCACAAGGG TTACATCACC
TACGGCAGCT TCAATCGGCT GAACAAGGTA AGCCGGCAGG TCGTCGCGCT CTGGGCAAGA
ATCCTGCACG CAGACCCGAG CGCGCGAATG ATCATCGGTG CCATCGAGGG CGATGCAGAC
CAGCAGACCT GTCTCACCAG GTTTGCCGAT GAAGGCATCG ACGCCGGGCG CCTGTCGTTC
CGTACCCGGA CCGAGACACC GGTGTACCTC CAGCAGCACC ATCACGTCGA CATCTGCCTT
GACACGTTCC CCTACACCGG GGCAACCACG ACAATCAATG CGCTATGGAT GGGCGTACCC
ACGGTAACCA TCGCAGGCAA CAGCCCGCTG AGCCGCGGCA GCGCTAGCTG GCTCGGTCAG
CTAGGACTCC ATCAGTACAT CGCGAACGAC GCAGACGACT TCGTCCAACG CGCGCTTGCC
CTGTCGAAGG ACCTGGATGC GTTGAAGCAG CTACGCGCCA CCCTGCGCGA GCGTTGCATG
CACGCGACGT CGATCCAGCC CGCGAACGTC GCGTCCAGCC TGTCCCTTGC GCTACGCGCG
ATGTGGGAAC GCTGGTGCGC GGGCCAGGCG CCCGATAGCT TCGAAATCGA ACCGGTTCAG
AACACGGTTG CACCCGCCGC AGCCAGCGAG CACGCGCTCC AGCCCGTCAC GTAA
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| Protein sequence | MPMSLSLSSP EVSEVLPQAQ QQEQDVLLIL QSALELQQAG AYEDARALYE IIIGAVPMHA
DAQYGYAMLK VQMGEPADSL RNFEVALGLS PDNRHYWVNY ISALFQSGQA SAAWIALDLA
QQRGVKGPDL DWLITQMARS NASPAPAAVA MPATTPNGTT PAATPGAPDQ AVGNASGTAT
ASGDKRKAPS SKVNKVNALI QDRQLEEAIA YARGLTAEYP SDGTAWGALG LALHQVGHFQ
DIVDAASRSV ELQPNDLVIR RLLANALREI GRLSESEAHC RHILSTAPDD ANTLWHLGSV
LHCQKRYDEA AVAGRRAVEL APNNALAHLS FGMVQIDRGQ VAEALGHLQT AIELDSNNTK
NNSAVLFRLT HCDAIDTATL TEAHFAYGKR NAIRTSPKRH ANVPDPRRKL RIGLVSGDLY
NHAVSTYLGA VVEYLAKDPS VSLHFYYNFT IEDEVTSFLQ AHAASWTVVT RMNDVGFAAT
VRRDEIDILI DLSGHTNHNR LPAFARKPAP IQVTWLGYPA TTGLDAMDYF LADRHSTPPG
LFDAQFSEKI VLLPAVAPYC PTAASPPVNT LPALHKGYIT YGSFNRLNKV SRQVVALWAR
ILHADPSARM IIGAIEGDAD QQTCLTRFAD EGIDAGRLSF RTRTETPVYL QQHHHVDICL
DTFPYTGATT TINALWMGVP TVTIAGNSPL SRGSASWLGQ LGLHQYIAND ADDFVQRALA
LSKDLDALKQ LRATLRERCM HATSIQPANV ASSLSLALRA MWERWCAGQA PDSFEIEPVQ
NTVAPAAASE HALQPVT
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