Gene Rmet_5219 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRmet_5219 
Symbol 
ID4042080 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCupriavidus metallidurans CH34 
KingdomBacteria 
Replicon accessionNC_007974 
Strand
Start bp1913121 
End bp1913687 
Gene Length567 bp 
Protein Length188 aa 
Translation table11 
GC content57% 
IMG OID637980637 
Producthypothetical protein 
Protein accessionYP_587347 
Protein GI94314138 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones41 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.307666 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTTAAAC GTCTGATATC GATTCTCGCA GTCTTGTCGC TGCTGTTACC GATTTCTTCT 
GCCTGGGCGG ACGAGTACAC CGACACGATC AAACTCTTCA AGAATGCAGG AGAAAGTGGC
CAGCTCCTCA AATCTGCTTA CGGCTACGCG GTATTTCCTA CAATTGGCAA GGGGGCTGTC
GGCATAGGTG GGGCCCATGG CAAGGGCCGT GTGTACGAAA AGGGAAAGTA TATCGGCGAC
ACGTCGATGA CCCAGGTGAC CGTGGGCCTG CAGCTCGGCG GCGAAGCCTA TAGCGAGATG
ATCGTGTTCG AGGATGAACG GGCGCTCAAG GAATTTACCG GTGGTAACTT TGAGTTCGGC
GCAGATGCCT CTGCGGTTGC GATTACGGCG GCTGCGGGCG CACAGACAAG CACGACAGGC
ACGTCTGCGC GTGCGAGCGC CGGCAAGAAA GACGCCAAGA CCGCGGGTGG CTATCACAAG
GGCATGGCGA CATTTACAGT GACCAAGGGC GGCTTGATGT ACGAGGCGAG CATTGGTGGC
CAGAAGTTCA GCTACAAGCC TCACTGA
 
Protein sequence
MLKRLISILA VLSLLLPISS AWADEYTDTI KLFKNAGESG QLLKSAYGYA VFPTIGKGAV 
GIGGAHGKGR VYEKGKYIGD TSMTQVTVGL QLGGEAYSEM IVFEDERALK EFTGGNFEFG
ADASAVAITA AAGAQTSTTG TSARASAGKK DAKTAGGYHK GMATFTVTKG GLMYEASIGG
QKFSYKPH