Gene Rmet_5204 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRmet_5204 
Symbol 
ID4042065 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCupriavidus metallidurans CH34 
KingdomBacteria 
Replicon accessionNC_007974 
Strand+ 
Start bp1898451 
End bp1899044 
Gene Length594 bp 
Protein Length197 aa 
Translation table11 
GC content67% 
IMG OID637980622 
Producthypothetical protein 
Protein accessionYP_587332 
Protein GI94314123 
COG category[C] Energy production and conversion 
COG ID[COG0778] Nitroreductase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.191632 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.211461 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTGCGC CAGTCGCATC CGATGTGCTC GACACCCTGT TCCTGACGGC CCGCAGCCAC 
AACGGCTGGC TCGACGGGGA CGTCTCCGAC GCCACATTGA CCCGGCTCTA TGCACTCGTC 
AGCCAGGGGC CGACCAGCGC CAACTGCAGC CCGATGCGCC TGGTCTTCGT GCGCTCCGAC 
GCCGCCAGGG CAAGGCTCCT GCCTACCCTC GCGCCAGCGA ATGTCGACAA GGTCAGGCAC 
GCCCCAGTCA CCGCCATCGT GGCCTACGAC ACGGCGTTCC ACGCGTTCGG CGAAACCTTG 
TTCCCGCACC GTCCCGCCAT GTTCGACACG TTCGCAGCGG ACCCCGCACT GGCTGCGGAA 
ACGGCGATGC GCAACGGCTC GATGCAGGGC GGCTACCTGA TTCTGGCGGC GCGCGCGCTC 
GGCCTGGACT GCGGCCCGCT CTCCGGCTTC AATGCGGACG CGGTGAACCG CGCCTTCTTT 
CCCGACGGGC GCTGGCGTGT CAACTTCCTG TGCAACCTTG GCAAGGGAGA CCCGGCGCGA 
CTGTTCGCAA AGCTGCCGCG ATTACCCTTC GATCAGGCCT GCCGCATCGA GTAG
 
Protein sequence
MSAPVASDVL DTLFLTARSH NGWLDGDVSD ATLTRLYALV SQGPTSANCS PMRLVFVRSD 
AARARLLPTL APANVDKVRH APVTAIVAYD TAFHAFGETL FPHRPAMFDT FAADPALAAE 
TAMRNGSMQG GYLILAARAL GLDCGPLSGF NADAVNRAFF PDGRWRVNFL CNLGKGDPAR 
LFAKLPRLPF DQACRIE