Gene Rmet_5170 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRmet_5170 
Symbol 
ID4042031 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCupriavidus metallidurans CH34 
KingdomBacteria 
Replicon accessionNC_007974 
Strand
Start bp1868211 
End bp1868585 
Gene Length375 bp 
Protein Length124 aa 
Translation table11 
GC content59% 
IMG OID637980588 
ProductNUDIX hydrolase 
Protein accessionYP_587298 
Protein GI94314089 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG1051] ADP-ribose pyrophosphatase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value0.140908 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.555587 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAACAA AGGTAAGGGC CACCGTAGTT TGCGCGCGCG GCGACCGCGT GCTACTGGTT 
TCAAAGGACG GCAGCAGATG GGCGCTACCG GGTGGCCGTC CGACAAAGAA CGAGACGTTT
GCTGACGCAG CAGGCCGGGA ACTTCTGGAG GAGACCACGT TACTGGCTCG CGGGCTCGGA
TTCTTGTTTC AAGTCGTTGG CGCAACCACC GTGCACCACG TCTTCGTCGC GAATATTGGG
AAATCGGCCG TGCCGAAGCC AAGCAAGGAA ATCCAGGGCT GCCAGTGGTT TTCGCAAGCC
GAGTTGGGAA AGATCATCAT TAGCCCAACG ACCCGTCACA TCATTGAGAG CGTCTGGGCG
GAGCGCCAGC GTTAG
 
Protein sequence
MKTKVRATVV CARGDRVLLV SKDGSRWALP GGRPTKNETF ADAAGRELLE ETTLLARGLG 
FLFQVVGATT VHHVFVANIG KSAVPKPSKE IQGCQWFSQA ELGKIIISPT TRHIIESVWA
ERQR