| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_5156 |
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| Symbol | paaE |
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| ID | 4042017 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cupriavidus metallidurans CH34 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007974 |
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| Strand | - |
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| Start bp | 1854522 |
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| End bp | 1855700 |
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| Gene Length | 1179 bp |
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| Protein Length | 392 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 637980574 |
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| Product | beta-ketoadipyl CoA thiolase |
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| Protein accession | YP_587284 |
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| Protein GI | 94314075 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG0183] Acetyl-CoA acetyltransferase |
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| TIGRFAM ID | [TIGR01930] acetyl-CoA acetyltransferases |
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Plasmid Coverage information |
| Num covering plasmid clones | 57 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.191291 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAGCAAG CTTTCATCAT CGACGCAATC CGTTCGCCGC TGGGCCGTTC CAAGCCCGGC
TCCGCCTTTA CCGAACTCCA TGCCACCGAA CTGCTGGCCC AGGTGCTGTC GCAGCTCGTG
CGGCGCAATG ACCTTGACCC GGGTCTGGTC GATGACGTCA TCACCGGTTG CGTGACGCAG
GCCGGCGAAC AGTCCGCAGG GGTTGGGCGC GTGGCCTGGC TGGCGGCGGG CTTTCCGGAG
CACGTGCCGG CCACCACCAT CGACCGCAAG TGCGGTTCGA GCCAGCAGGC CGTTCACTTT
GCCGCGCAGG GCATCATGGC CGGCGCGTAC GACATCGTGA TTGCCTGCGG CATCGAGTCC
ATGAGCCGGG TGCCGATGGG CGCGGCGCGT ATTGGCCAGA ACCCATATGG TCCGTCGTTT
GAGGAACGCT ACGCGCCGGG GCTGGTCGGG CAGGGCGTGT CGGCCGAGCT GGTTGCCGCC
AAGTGGGAGC TTTCGCGTCA CGACATGGAC AGCTACTCGG CGCGCTCGCA CCAGCGTGCC
GCCGCCACCC AGGCAGCCGG CGGATTCAAG CGCGAGATCG TCGGCATCCA GACCGTGAAT
GGTCTGGTGG AGCAGGACGA GACGATCCGC GCCAACACCA CCGTGGAGCG CCTGGCGACG
CTGGAGTCGC CATTCCGCAA CGACGAACTG AGTGCCCGTT TTCCGCAGAT CGGCTGGAAT
GTTACCGCCG GCAACGCCTC GCAGATCAGT GATGGTGCGG CCGCAATCCT GATTGTCAGC
GAGCGCATGG CCACGAAGCT CGGCCTCAAG CCGCGCGCGC GTTTTGTCGG TTTCGACGTG
ATCGGCGCCA ATCCGCTGGA GATGCTGACC GCGCCGATCC CCGCCACCCA GCGCGTGCTG
GCAAAGACCG GCATGACGCT CGAGCAGATC GCGCACTACG AAATCAACGA GGCATTCGCC
AGTGTGCCGA TGGCCTGGCA GAAGACGATG AAGGCCGATG GCGCGCGCCT GAACCCGCGC
GGTGGCGCGA TCGCGCTAGG TCACCCGCTT GGCGCATCGG GCGTGCGGCT GATGACCACC
ATGCTCCATG CGCTGGAAGA CAGCGGCGAG CGCTTCGGCC TGCAGTCGAT GTGCGAAGCG
GGCGGCATGG CGAACGCCAC GATCATCGAG CGCGTCTGA
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| Protein sequence | MQQAFIIDAI RSPLGRSKPG SAFTELHATE LLAQVLSQLV RRNDLDPGLV DDVITGCVTQ
AGEQSAGVGR VAWLAAGFPE HVPATTIDRK CGSSQQAVHF AAQGIMAGAY DIVIACGIES
MSRVPMGAAR IGQNPYGPSF EERYAPGLVG QGVSAELVAA KWELSRHDMD SYSARSHQRA
AATQAAGGFK REIVGIQTVN GLVEQDETIR ANTTVERLAT LESPFRNDEL SARFPQIGWN
VTAGNASQIS DGAAAILIVS ERMATKLGLK PRARFVGFDV IGANPLEMLT APIPATQRVL
AKTGMTLEQI AHYEINEAFA SVPMAWQKTM KADGARLNPR GGAIALGHPL GASGVRLMTT
MLHALEDSGE RFGLQSMCEA GGMANATIIE RV
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