| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_5135 |
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| Symbol | |
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| ID | 4041996 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cupriavidus metallidurans CH34 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007974 |
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| Strand | + |
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| Start bp | 1832913 |
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| End bp | 1833803 |
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| Gene Length | 891 bp |
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| Protein Length | 296 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 637980553 |
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| Product | LysR family transcriptional regulator |
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| Protein accession | YP_587263 |
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| Protein GI | 94314054 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 36 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.428363 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAGACTC GCGATCTGGA ATACGTCCTG GCTGTGGAAA CCCACGGTGG CATCGGGCGC
GCCGCCGAGG CACTGGACAT GACCCAGCCG GCACTTACCA AGGCCGTGCA GCGCGTGGAG
GCGCAACTGG GCGTACCGCT GTTCGAACGC ACGACGCTGG GTATGCGCGT CACGCAGGCG
GGAGCGGTCT TTCTGGAACG GGCACGCCGG ATCCGGCTGG AATATGAAGA TGCAATCAAG
GAAATGCGCG GCATCCAGAC CGGCGAACAA GGGATGCTGC GCCTCGGCTA TTCCCCTTCG
ATGCCCAATG CGCTGGTGCT GGGCGCGTGT CGGCAACTGA TTCGCGAGCG GCCAGTGGCA
CGACTGCGCC TGACGATGCG TGTGGCGCGC GAGTTGATGG ACCTGCTGCA GGCCGGCGAA
CTCGACCTGG CCATCGCCCC GTTGCCGCGT CAGGCGAACC CGGCCCTGGT ATCGCGTGAA
CTGTTCACCG ACCGCCTGGC CGTGGTGGCC GACGAGAATC ATCCGTTGCT ACGACGACGC
AACCTGACGC TGGCGGACCT GACCGACCAG CAGTGGCTGC TGCCTAGCTC GCACGTGCTG
ATCCGCCAGC AGATCGACGC CGCCTTCACG GAACTGGGCT TGCCCGCACC GATCCTGCGC
GTGGAGACCG ACTTCGGCAG CACGGCCCTC TTCGATCTGG TGCGCGGCAC CGAAATGCTC
TGCATCGCGG GATCAACCAG CAATGGCGCA CAGACGGGCC TGCGCCCCAT CGCACTGCGA
CCTGATGCCC TGGACCTGGG CCGACGGGTA GGCGTGATGT CGCGGGCGGG TGCCTATCTC
TCGCCGCTGG CCCTGCGCAT GATCGGTATT TTCGAGGCGC GGATGCAATG A
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| Protein sequence | METRDLEYVL AVETHGGIGR AAEALDMTQP ALTKAVQRVE AQLGVPLFER TTLGMRVTQA
GAVFLERARR IRLEYEDAIK EMRGIQTGEQ GMLRLGYSPS MPNALVLGAC RQLIRERPVA
RLRLTMRVAR ELMDLLQAGE LDLAIAPLPR QANPALVSRE LFTDRLAVVA DENHPLLRRR
NLTLADLTDQ QWLLPSSHVL IRQQIDAAFT ELGLPAPILR VETDFGSTAL FDLVRGTEML
CIAGSTSNGA QTGLRPIALR PDALDLGRRV GVMSRAGAYL SPLALRMIGI FEARMQ
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