Gene Rmet_5117 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRmet_5117 
Symbol 
ID4041978 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCupriavidus metallidurans CH34 
KingdomBacteria 
Replicon accessionNC_007974 
Strand
Start bp1811186 
End bp1811671 
Gene Length486 bp 
Protein Length161 aa 
Translation table11 
GC content62% 
IMG OID637980535 
Producthypothetical protein 
Protein accessionYP_587245 
Protein GI94314036 
COG category[R] General function prediction only 
COG ID[COG0824] Predicted thioesterase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value0.357034 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAGCCT CTTTCGATCC ACGCTGCCCT GCCAGCCCCA TCATGGCCCG CCTCAAACTC 
GACCTGCCTG CCGACCAGTT CTGCTATTCC ACCCACCTGA CCGTTCGCGT CACCGACATC
AACTCCGCCA ATCACCTGGC CAACGATTCG ATGATCTCGA TGATCTCGGA GGCACGGGCC
CGCTTTCTCT TCCAGTTCGG CAGCGAGGGC GACCGCGTGG ACGGTGCGGG CATCATCGTC
ACCGACCTGG CCACGATGTA TCGCAAGGAG GCCCACGCAC GCGACCAGCT TCTGTTCGAG
GTGGGTGTAA TGGACTTCAA CAAGTACGGC GGCGACATCA TCTTCCGAAT CACGCGCCCG
CAGGATGGCG CCCTGATCGC CATGGCCAAG TCCGGCTTCG TCTTCTTCGA TTACGCCACC
ACGCGCGTGG TGCCGATGCC CGATGGCTTC GCCGCGCGAT TCCCGAAGGT GAACTGGGTC
GATTGA
 
Protein sequence
MAASFDPRCP ASPIMARLKL DLPADQFCYS THLTVRVTDI NSANHLANDS MISMISEARA 
RFLFQFGSEG DRVDGAGIIV TDLATMYRKE AHARDQLLFE VGVMDFNKYG GDIIFRITRP
QDGALIAMAK SGFVFFDYAT TRVVPMPDGF AARFPKVNWV D