| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_5116 |
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| Symbol | |
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| ID | 4041977 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cupriavidus metallidurans CH34 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007974 |
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| Strand | - |
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| Start bp | 1809995 |
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| End bp | 1811014 |
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| Gene Length | 1020 bp |
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| Protein Length | 339 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 637980534 |
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| Product | fimbrial protein |
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| Protein accession | YP_587244 |
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| Protein GI | 94314035 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3539] P pilus assembly protein, pilin FimA |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.0391315 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATTCGAA GAGTATGGAA TGAGACGCTG CAGAAGATGC TGTGTGGACT GGCCTTGGTG
GCCGTATCTG ATGCCGTTCA CGCGTTGGGA GATTGCTCGA CATCGCCTTC CATGCCTTAC
TTGCAGGCGA TGAACAATAT GGCCGTGGCG GTTAACCTTG CGGTTGGCGC GGCCATCCCG
GGCACGAGGC GAAACTACAC GTTCAGCGGT CGATGCGTCG CGGACGGCAA CAATTTGATT
TATGCAGGAG CGCCGATCAT TGCGTGCTAT TACGGAAGCG GCAGAGAAAT CACCCCAGGC
GTGTATTCGA CAGGTGTCGC TGGCATTGGC ATTCGGCTAC GGAACGCCGT GGGACAGCCT
TTGACCAATG CTATCGGCGT GACCTGCGAT ACAAGAGCGG CGGCTCTGGG AGCGCTGGCG
GCTGACCTTT CGTATTCGGT GTCCGTTTCC ATCGAATTCG TGAAAACGGG AGCGATCGGT
CAAGGTAGCC TGGATCCTTC GCAAACGCTC TTTGGTTTTG GTGTTTATCG TTCAGCAGTC
GGCCTGGGCG GTGGAGGGAA CCACATAGGC TTTACTGGCA GCGCCACGCC ACGTCAGATT
ACCTGCACGA CACGTGCTCC GACGACCGTT GCCCTTCCGG ATGCCACGGT ATCGAGTCTT
TCCGGGAATG GTTCGACGAC GGGCTTTGCG CCATTCTCCA TCGGGCTCAT ATGCGATGGC
GCGGCAGTTG TGGGCATATC CTTCGACGGC GCCGGCGGGA CGCCTGTCAG ATCCGCTTCC
ACGGGCGTGC TGGGCATCCA GAACGAAGGC GCGGCCGGCA TGGCCAGCGG GGTTGGTGTG
CAGTTGATCA ACGACGGCAC TTATTCCCCC GTACCCCTGC AAACGCGCAA TCATCTTGGC
AACATCTCCG CCAACGGCAT GGCCTCGTAT CGCTATGCGT TTCGGTACCA CAGCCTTTCG
GCCAGACCTA GTCCTGGCAC CGTGAGGGGT ACGATGGTTT TCACTTTCGA CTATCAGTAG
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| Protein sequence | MIRRVWNETL QKMLCGLALV AVSDAVHALG DCSTSPSMPY LQAMNNMAVA VNLAVGAAIP
GTRRNYTFSG RCVADGNNLI YAGAPIIACY YGSGREITPG VYSTGVAGIG IRLRNAVGQP
LTNAIGVTCD TRAAALGALA ADLSYSVSVS IEFVKTGAIG QGSLDPSQTL FGFGVYRSAV
GLGGGGNHIG FTGSATPRQI TCTTRAPTTV ALPDATVSSL SGNGSTTGFA PFSIGLICDG
AAVVGISFDG AGGTPVRSAS TGVLGIQNEG AAGMASGVGV QLINDGTYSP VPLQTRNHLG
NISANGMASY RYAFRYHSLS ARPSPGTVRG TMVFTFDYQ
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