| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_5103 |
|---|
| Symbol | |
|---|
| ID | 4041964 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cupriavidus metallidurans CH34 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007974 |
|---|
| Strand | - |
|---|
| Start bp | 1794981 |
|---|
| End bp | 1795514 |
|---|
| Gene Length | 534 bp |
|---|
| Protein Length | 177 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 637980521 |
|---|
| Product | putative deaminase-reductase |
|---|
| Protein accession | YP_587231 |
|---|
| Protein GI | 94314022 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0262] Dihydrofolate reductase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 0.196421 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 16 |
|---|
| Fosmid unclonability p-value | 0.81615 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCACCG CACACGTCTT CATCGCCACC AGCCTCGACG GCTTCATCGC CCGACCCGAT
GGCGATATCG GCTGGCTGCT CCAGCGCGAC GATCCGGCCG AGGACCACGG TTATATGGAT
TTCATCGCCG ACAAGGATGC GATCGTGATG GGCCGGGGCA CCTACGAAAA GGTCCTGACC
CTTGGCGACT GGGCCTATGA CCGGCCTGTC CTGGTCCTGT CCAGGCAATT GGCGGGCACG
CCGGTGCCGG CGGCGTTGGA GGGGAAAGTC CGATTCGCGA GCCTTTCGCC GAGGGATACG
CTGGAACGCC TGGCGGCCGA GGGCGTACGC CGGGTCTATG TCGATGGCGG GCAGGTTGTG
CAGTCGTTCC TGCGCGACGG GTTGATCGCC GATCTGGTGG TCACCACGGT TCCGGTGTTG
ATCGGAGCCG GGCGGCCGTT GTTCGGGGCG CTGCCGCGCG ACGTCGATCT GGCCCTGGTC
TCGAGCCGCA GCTTCCCCTC GGGATTGGTG CAGTCGACGT ACCGGGTGGC CTGA
|
|---|
| Protein sequence | MTTAHVFIAT SLDGFIARPD GDIGWLLQRD DPAEDHGYMD FIADKDAIVM GRGTYEKVLT
LGDWAYDRPV LVLSRQLAGT PVPAALEGKV RFASLSPRDT LERLAAEGVR RVYVDGGQVV
QSFLRDGLIA DLVVTTVPVL IGAGRPLFGA LPRDVDLALV SSRSFPSGLV QSTYRVA
|
|---|
| |