| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_5089 |
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| Symbol | dppB |
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| ID | 4041950 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cupriavidus metallidurans CH34 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007974 |
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| Strand | + |
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| Start bp | 1779167 |
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| End bp | 1780102 |
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| Gene Length | 936 bp |
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| Protein Length | 311 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 637980507 |
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| Product | branched-chain amino acid ABC transporter membrane protein |
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| Protein accession | YP_587217 |
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| Protein GI | 94314008 |
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| COG category | [E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism |
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| COG ID | [COG0601] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 0.242511 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.40775 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGTTACC TGATCCGCCG CCTGCTGGCC ACGCTGCCGG TGATGGCCGT GGTGGCCATC
GTGGTCTTCC TGCTGATCCA CCTGTCGCCG GGCGACCCGG CGGCACTGAT CGCGGGCGAC
CTTGCCACTG TCGAGGACAT CGCGCGCCTG CGTGCCACGC TTGGCCTCGA CCAGCCGCTG
TGGCAACAGT TCGGGCTCTG GGCCGGACGG CTCGCCAGCG GAGACCTGGG CACCTCCATC
TTCACGCAGA TGCCGGTGAC CGAGCTGCTG GCCCAGCGGC TGGAGCCGAC GCTGTCAATC
GCCGCGCTGA CCATGCTGCT GACGCTGCTG GTATCGGTGC CGCTGGGCAC GCTGGCGGCC
TATCGCGCGG GTAGCTGGAT CGACCGGCTG GTGATGCTGT TCGCCGTGCT GGCGTTCTCG
CTCCCGGTAT TCCTTGTGGG CTACCTGCTG GTCTATGCGT TCGCGATCCA GTTGCCGTGG
TTTCCGGTGC AGGGCTATGC CCGGCTGGCC GATGGCGCCG GGGGCTGGCT ACGTAGCCTG
GTGCTGCCGT GCGTCAACCT GGCGTTGGTG TACATCGCCC TGATCACCCG CATGACGCGC
GCCACGGTGC TGGAAGTGCT GCACGAAGAC TACATCCGCA CCGCCCGCGC CAAGGGGCTC
GGTGTGCTGC CGGTGCTCGG CCATGCGCTG CGCAACGCGG CCATCCCGAT TGCGACCACG
GTCGGCACCG GCATCGCGCT GCTGATCGGC GGCGTGGTGG TGACCGAGAC CGTGTTCGCG
ATTCCAGGCG TCGGCCGGCT GGTGGTGGAT TCGGTGCAAC GCCACGACTA CCCGGTCATC
CAGAGCGTGC TGCTGCTCTC GGCAGGTGCC TATGTGCTGA TCAACCTGAT GATCGACCTC
AGCTACCGGC TGTTCGATCC CCGCATCAAA TACTGA
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| Protein sequence | MGYLIRRLLA TLPVMAVVAI VVFLLIHLSP GDPAALIAGD LATVEDIARL RATLGLDQPL
WQQFGLWAGR LASGDLGTSI FTQMPVTELL AQRLEPTLSI AALTMLLTLL VSVPLGTLAA
YRAGSWIDRL VMLFAVLAFS LPVFLVGYLL VYAFAIQLPW FPVQGYARLA DGAGGWLRSL
VLPCVNLALV YIALITRMTR ATVLEVLHED YIRTARAKGL GVLPVLGHAL RNAAIPIATT
VGTGIALLIG GVVVTETVFA IPGVGRLVVD SVQRHDYPVI QSVLLLSAGA YVLINLMIDL
SYRLFDPRIK Y
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