Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rmet_5066 |
Symbol | |
ID | 4041928 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cupriavidus metallidurans CH34 |
Kingdom | Bacteria |
Replicon accession | NC_007974 |
Strand | - |
Start bp | 1755027 |
End bp | 1756331 |
Gene Length | 1305 bp |
Protein Length | 434 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 637980487 |
Product | MFS family transporter |
Protein accession | YP_587197 |
Protein GI | 94313988 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 0.714396 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTGGCCG CTTCAGGTCA TCAGGGCTCC GAGGGCAACG ACCGAACCTT GCTGTACTTT GGTTGGCTGA CCCTGTTCAT CTATCTGGCG ACGCCGGCTG GCGCGCTCGT CGATATCCAG ACGTCGTATG TCCTCAAGAA CGAGTTGCAC GCGACGGCAA CGCAGATCTC CACATTTCGG CTAGTGACGG GCATCCCCGT CTATGTGGCG TTCGTTTTCG GACTGGCGCG GGACCAATGG AACCCGCTCG GGTTACGGGA TCGCGGCTAC TTCCTGATAT TCGCGCCGAT GACCGCGCTG GCCTGCGTCT GGATGGCGTA TTCGGGGTTC TCGTACACCG GGCTGCTGGC CGGGACCCTG ATGGCCATGC TGGCATTCCG GTTCGTCGCG GCCGCCTATC AGGGGCTGAT CGCCCTGGTC GGCCAGGAAA AGCTCATGTC CGGCCGCCTG AGCGCGCTGT GGAACGTGAT CGGGTCTGTT CCGGTCGTGG CGGGCGCCTT TGCTTCCGGC TATGTTTCCG ACCATCTGGC GGCGGCGGAA GCGTTCTTCC TGGTGGCGAT TGTCAATCTG CTGATCGTCG CGCTAGCGCT CTGGAAACCC CCGTCGGTCT TCGGCCAGAT CTATGACAGG CCCCTGGCCC GTGCCACCGA TTTCGTCGGG AACGTCAGGC GGCTGGTCAG ACACAAGGCC GTCTATCCGG CAGTGCTGAT CTGCTTTCTG TGGAACTTCG CCCCGGGCTC GGCCACGCCG CTGCAGTTCT ACCTGACCAA CGAATTGCAC GCGTCGGACT CCGTTTACTC GTACTACAAC GGCATCTTCG CTGCCGCATT TGTGCCGACG TTCCTGCTTT ATGGCTATCT GTGCAAGCGG GTGGCGCTGA ACAGGCTGCT GTGGTGGGGC ACGATCATCG CCGTGCCGCA GATGGTCCCG CTGGCGTTCA TCCATTCCGC CGACCTTGCG CTGGTGCTGG CCGCGCCAAT CGGGCTGATG GGCGGCATCG CCACGGCAGC CTATCTCGAC CTCGCGATGC GGTCGTGCCC GCCGGGCCTG CAAGGCACTC TGATGATGCT GGTGGATGGG GTCCTCGCGC TCTCGGGCCG CGCTGGCGAT CTGCTGGGCT CCTGGATCTA CAATAGCGTG CCCTCGCACG GATTCACCTA TTGCGTGATT GCCACCACCG CCGTGTATGG GCTGATCCTG GCCGTGATCC CGCTGGCGCC GAAGGCGCTG ATTGCCACCC GGGATGGCGA GCCAGCCTTG ACGGCGCAAG CCGAGGCCTT GAACGAGAGT CGGGAGAGTC TATGA
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Protein sequence | MLAASGHQGS EGNDRTLLYF GWLTLFIYLA TPAGALVDIQ TSYVLKNELH ATATQISTFR LVTGIPVYVA FVFGLARDQW NPLGLRDRGY FLIFAPMTAL ACVWMAYSGF SYTGLLAGTL MAMLAFRFVA AAYQGLIALV GQEKLMSGRL SALWNVIGSV PVVAGAFASG YVSDHLAAAE AFFLVAIVNL LIVALALWKP PSVFGQIYDR PLARATDFVG NVRRLVRHKA VYPAVLICFL WNFAPGSATP LQFYLTNELH ASDSVYSYYN GIFAAAFVPT FLLYGYLCKR VALNRLLWWG TIIAVPQMVP LAFIHSADLA LVLAAPIGLM GGIATAAYLD LAMRSCPPGL QGTLMMLVDG VLALSGRAGD LLGSWIYNSV PSHGFTYCVI ATTAVYGLIL AVIPLAPKAL IATRDGEPAL TAQAEALNES RESL
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