Gene Rmet_5043 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRmet_5043 
Symbol 
ID4041905 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCupriavidus metallidurans CH34 
KingdomBacteria 
Replicon accessionNC_007974 
Strand
Start bp1729567 
End bp1730223 
Gene Length657 bp 
Protein Length218 aa 
Translation table11 
GC content61% 
IMG OID637980464 
Producthypothetical protein 
Protein accessionYP_587174 
Protein GI94313965 
COG category[S] Function unknown 
COG ID[COG5490] Uncharacterized conserved protein 
TIGRFAM ID[TIGR01841] phasin family protein 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAACGGG ATCGGGCCGG GCAATCGGGG CGCTTGCCCG GCCCGGACGA TACGCGGACC 
CGTGTGCCGT GTCAGCCGCT CGGCGCGCCC AGGCGATACC CCCCTTATTC ATTCCCCAGT
TCCCTTGCGG CACGCATTAC ACTTAGCCTG CCGCGTGGCG ATCGGGCGAC TTCACCCGTG
AGCCGGCGCC GCTCGACTTC TGCTTGCTCT ACCCCAACAA GGAGATTTGT CATGGCTACC
GCGCCCAATC CGTTCACCGA TATCACCAAA CTGCTGGAAC AGTACAAGCT CCCCGGCGTC
GACATGACTT CGATCATCGA AGCGCGGCGC AAGGATATCG AAGCCCTCGC GGAGGCCAAC
AGGATTGCCT ATGAGGGCAT GCAGGCACTC GTGCAGAAGC AGACTGAAAT CCTGAGCAAG
AGCATGCAGG AGATTCAGGC CACGGCCCAG AAGATGGCCA CGAGTGGCAA TCCCGCAGAG
GCCATGACCA GGCAGGGCGA ATTGGTACAG CAAGGCTTGC AGACAGCCTT CAACAACATG
CGCGAACTGG CGGAAATGGC ACAGAAATCG CAAGCCGAGG CACTGGCCGT GATCACCAAG
CGTGCCGAGC AGAGCATCGC GGAAGCAAAA AGCCTGATGA AGCCGGCGGG CAAGTAG
 
Protein sequence
MQRDRAGQSG RLPGPDDTRT RVPCQPLGAP RRYPPYSFPS SLAARITLSL PRGDRATSPV 
SRRRSTSACS TPTRRFVMAT APNPFTDITK LLEQYKLPGV DMTSIIEARR KDIEALAEAN
RIAYEGMQAL VQKQTEILSK SMQEIQATAQ KMATSGNPAE AMTRQGELVQ QGLQTAFNNM
RELAEMAQKS QAEALAVITK RAEQSIAEAK SLMKPAGK